RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1010780" and tax_phylum = "Candidatus Wildermuthiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Wildermuthiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1010780 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30097741 30097741 PRJNA1010780_S_NODE_55032_length_164_cov_1.682171_g53743_i0 PRJNA1010780 55032 164 1.682171 2.75876044 Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_ 2053642 Bacteria Bacteria 63.2 7.11e-10   NR OHA66634.1 1802450 g53743 i0 58.8 0.932926829268293 51 20 91.5 1 154 5 212 262 OHA66634.1 MAG: N-methyltryptophan oxidase, partial [Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_45_25] diamond 153 63.2 1 Bacteria Bacteria candidate phyla   Candidatus Wildermuthiibacteriota         Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_45_25

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;