RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1010780" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1010780 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27634993 27634993 PRJNA1010780_S_NODE_21464_length_372_cov_3.228487_g20175_i0 PRJNA1010780 21464 372 3.228487 12.00997164 Candidatus Methylomirabilis sp. 2032687 Bacteria Bacteria 168 3e-50   NR HXJ83355.1 2032687 g20175 i0 61.2 0.935483870967742 116 43 91.9 1 4 345 91 206 HXJ83355.1 hypothetical protein [Candidatus Methylomirabilis sp.] diamond 348 168 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis sp.
27785440 27785440 PRJNA1010780_S_NODE_9604_length_795_cov_13.030263_g8686_i0 PRJNA1010780 9604 795 13.030263 103.59059085 Bacteria 2 Bacteria Bacteria 199 3.88e-60   NR HXJ83355.1 2032687 g8686 i0 55.8 1.22264150943396 163 67 60.4 3 673 194 46 206 HXJ83355.1 hypothetical protein [Candidatus Methylomirabilis sp.] diamond 972 199 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;