RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1010780" and tax_phylum = "Candidatus Margulisiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Margulisiibacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1010780 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26749326 26749326 PRJNA1010780_S_NODE_48921_length_178_cov_1.447552_g47632_i0 PRJNA1010780 48921 178 1.447552 2.57664256 Candidatus Marinamargulisbacteria bacterium SCGC AG-41 2933166 Bacteria Bacteria 52.8 4.43e-6   NR RAP32559.1 2184345 g47632 i0 47.2 0.893258426966292 53 25 87.6 2 176 21 992 1042 RAP32559.1 hypothetical protein DID75_04685 [Candidatus Marinamargulisbacteria bacterium SCGC AG-410-N11] diamond 159 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota Candidatus Marinamargulisbacteria       Candidatus Marinamargulisbacteria bacterium SCGC AG-410-N11
27382410 27382410 PRJNA1010780_S_NODE_42323_length_198_cov_1.766871_g41034_i0 PRJNA1010780 42323 198 1.766871 3.49840458 Candidatus Marinamargulisbacteria bacterium SCGC AG-41 2933166 Bacteria Bacteria 61.2 6.11e-9   NR RAP32559.1 2184345 g41034 i0 44.4 0.954545454545455 63 35 95.5 0 5 193 1038 1100 RAP32559.1 hypothetical protein DID75_04685 [Candidatus Marinamargulisbacteria bacterium SCGC AG-410-N11] diamond 189 61.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota Candidatus Marinamargulisbacteria       Candidatus Marinamargulisbacteria bacterium SCGC AG-410-N11

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;