RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1010780" and tax_phylum = "Candidatus Joergenseniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Joergenseniibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1010780 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26939548 26939548 PRJNA1010780_S_NODE_48122_length_180_cov_1.482759_g46833_i0 PRJNA1010780 48122 180 1.482759 2.6689662 Candidatus Jorgensenbacteria bacterium GW2 2268185 Bacteria Bacteria 57 1.35e-7   NR KKW14660.1 1618665 g46833 i0 49.2 1.96666666666667 59 26 98.3 1 179 3 227 281 KKW14660.1 MAG: NAD-dependent epimerase/dehydratase [Candidatus Jorgensenbacteria bacterium GW2011_GWB1_50_10] diamond 354 57 1 Bacteria Bacteria candidate phyla   Candidatus Joergenseniibacteriota         Candidatus Jorgensenbacteria bacterium GW2011_GWB1_50_10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;