RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1010780" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1010780 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27319284 27319284 PRJNA1010780_S_NODE_61383_length_153_cov_1.423729_g60094_i0 PRJNA1010780 61383 153 1.423729 2.17830537 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 59.7 1.15e-8   NR MCH8518684.1 2044595 g60094 i0 52.9 3.86274509803922 51 24 100 0 1 153 168 218 MCH8518684.1 aldehyde dehydrogenase family protein [Candidatus Altimarinota bacterium] diamond 591 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30287777 30287777 PRJNA1010780_S_NODE_33892_length_237_cov_2.118812_g32603_i0 PRJNA1010780 33892 237 2.118812 5.02158444 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 42.7 0.0255   NR MCK5461314.1 2044595 g32603 i0 32.8 0.810126582278481 64 42 81 1 200 9 2 64 MCK5461314.1 tetratricopeptide repeat protein [Candidatus Altimarinota bacterium] diamond 192 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32184405 32184405 PRJNA1010780_S_NODE_44498_length_190_cov_2.509677_g43209_i0 PRJNA1010780 44498 190 2.509677 4.7683863 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 65.9 1.23e-10   NR MDX9970769.1 2044595 g43209 i0 42.6 3.85263157894737 61 35 96.3 0 188 6 23 83 MDX9970769.1 asparagine--tRNA ligase [Candidatus Altimarinota bacterium] diamond 732 65.9 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;