RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1010780" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1010780 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26845029 26845029 PRJNA1010780_S_NODE_62981_length_151_cov_1.189655_g61692_i0 PRJNA1010780 62981 151 1.189655 1.79637905 Gracilimonas sp. 1974203 Bacteria Bacteria 59.7 1.11e-8   NR WP_395080423.1 1974203 g61692 i0 58 0.993377483443709 50 21 99.3 0 1 150 466 515 WP_395080423.1 histidine kinase N-terminal 7TM domain-containing protein [Gracilimonas sp.] diamond 150 59.7 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Gracilimonas Gracilimonas sp.
29813387 29813387 PRJNA1010780_S_NODE_3571_length_1419_cov_5.739162_g3217_i0 PRJNA1010780 3571 1419 5.739162 81.43870878 Aliifodinibius sp. S!AR15-1 1872440 Bacteria Bacteria 398 1.9e-130   NR WP_310687101.1 2950437 g3217 i0 44.6 3.09090909090909 484 241 97.7 11 23 1408 42 520 WP_310687101.1 glycoside hydrolase family 32 protein [Aliifodinibius sp. S!AR15-10] diamond 4386 398 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Fodinibius Aliifodinibius sp. S!AR15-10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;