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contig_metadata

17 rows where bioproject = "PRJNA1010780", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 17 ✖

tax_kingdom 1

  • Bacillati · 17 ✖

bioproject 1

  • PRJNA1010780 · 17 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15457862 15457862 PRJNA1010780_S_NODE_9353_length_811_cov_3.747423_g8450_i0 PRJNA1010780 9353 811 3.747423 30.39160053 Chthonomonas calidirosea 454171 Bacteria Bacteria 411 9.89e-142   NR WP_016483035.1 454171 g8450 i0 73.9 0.950678175092478 257 65 94.3 1 810 46 62 318 WP_016483035.1 sugar phosphate isomerase/epimerase family protein [Chthonomonas calidirosea] diamond 771 411 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas calidirosea
19280653 19280653 PRJNA1010780_S_NODE_28376_length_279_cov_3.881148_g27087_i0 PRJNA1010780 28376 279 3.881148 10.82840292 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 52.8 0.026   NTclustered gi|2076447151|gb|CP075366.1| 2682144 g27087 i0 100 0.100358422939068 28 0 10 0 170 197 1399799 1399772 MAG: Fimbriimonadaceae bacterium isolate ACE_ARM8 chromosome blastn 28 52.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
26781573 26781573 PRJNA1010780_S_NODE_50961_length_173_cov_1.340580_g49672_i0 PRJNA1010780 50961 173 1.34058 2.3192034 Armatimonadota bacterium 2033014 Bacteria Bacteria 66.6 2.96e-11   NR MBC8138190.1 2033014 g49672 i0 56.9 0.884393063583815 51 22 88.4 0 153 1 30 80 MBC8138190.1 DUF4419 domain-containing protein [Armatimonadota bacterium] diamond 153 66.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
26971109 26971109 PRJNA1010780_S_NODE_10302_length_754_cov_6.186370_g9339_i0 PRJNA1010780 10302 754 6.18637 46.6452298 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 49.7 0.00658   NR MBX3097899.1 2682144 g9339 i0 33.3 0.29840848806366 75 49 29.4 1 524 745 88 162 MBX3097899.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 225 49.7 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
27571713 27571713 PRJNA1010780_S_NODE_28324_length_280_cov_2.114286_g27035_i0 PRJNA1010780 28324 280 2.114286 5.9200008 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 87.8 8.43e-18   NR HEY3781194.1 2682144 g27035 i0 48.4 0.975 91 45 97.5 1 273 1 475 563 HEY3781194.1 formylglycine-generating enzyme family protein [Fimbriimonadaceae bacterium] diamond 273 87.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
27918969 27918969 PRJNA1010780_S_NODE_29045_length_273_cov_2.323529_g27756_i0 PRJNA1010780 29045 273 2.323529 6.34323417 Armatimonadota bacterium 2033014 Bacteria Bacteria 60.1 2.76e-8   NR MDQ2799281.1 2033014 g27756 i0 44.3 0.868131868131868 79 38 85.7 3 36 269 85 158 MDQ2799281.1 alpha/beta hydrolase [Armatimonadota bacterium] diamond 237 60.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28076853 28076853 PRJNA1010780_S_NODE_47685_length_181_cov_1.746575_g46396_i0 PRJNA1010780 47685 181 1.746575 3.16130075 Armatimonadota bacterium 2033014 Bacteria Bacteria 42.4 0.0229   NR MFN3650225.1 2033014 g46396 i0 58.6 0.480662983425414 29 11 46.4 1 25 108 394 422 MFN3650225.1 alpha-L-fucosidase [Armatimonadota bacterium] diamond 87 42.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28763906 28763906 PRJNA1010780_S_NODE_47047_length_183_cov_1.256757_g45758_i0 PRJNA1010780 47047 183 1.256757 2.29986531 Bacteria candidate phyla 1783234 Bacteria Bacteria 45.4 0.00184   NR MBM3457507.1 2033014 g45758 i0 39.7 3 63 35 98.4 1 182 3 225 287 MBM3457507.1 hypothetical protein [Armatimonadota bacterium] diamond 549 45.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28866192 28866192 PRJNA1010780_S_NODE_15268_length_533_cov_5.305221_g14053_i0 PRJNA1010780 15268 533 5.305221 28.27682793 Fimbriimonadia bacterium 2575566 Bacteria Bacteria 90.1 2.49e-17   NR MCW5935503.1 2575566 g14053 i0 30.2 0.968105065666041 172 116 95.7 3 510 1 45 214 MCW5935503.1 M60 family metallopeptidase [Fimbriimonadia bacterium] diamond 516 90.1 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia       Fimbriimonadia bacterium
30501013 30501013 PRJNA1010780_S_NODE_45293_length_188_cov_1.673203_g44004_i0 PRJNA1010780 45293 188 1.673203 3.14562164 PVC group 1783257 Bacteria Bacteria 61.2 5.32e-9   NR HEY3284826.1 2033014 g44004 i0 54.8 12.8936170212766 62 24 98.9 2 187 2 430 487 HEY3284826.1 PAS domain S-box protein [Armatimonadota bacterium] diamond 2424 61.6 0.993506493506494 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31362002 31362002 PRJNA1010780_S_NODE_51956_length_170_cov_2.207407_g50667_i0 PRJNA1010780 51956 170 2.207407 3.7525919 Fimbriimonadia bacterium 2575566 Bacteria Bacteria 53.9 1.58e-6   NR MEP0767396.1 2575566 g50667 i0 46.9 0.864705882352941 49 24 82.9 1 30 170 568 616 MEP0767396.1 glycoside hydrolase family 127 protein [Fimbriimonadia bacterium] diamond 147 53.9 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia       Fimbriimonadia bacterium
32026112 32026112 PRJNA1010780_S_NODE_32378_length_247_cov_1.820755_g31089_i0 PRJNA1010780 32378 247 1.820755 4.49726485 Fimbriimonadia bacterium 2575566 Bacteria Bacteria 43.1 0.0283   NR MEP0765571.1 2575566 g31089 i0 39.4 0.801619433198381 66 37 76.5 2 24 212 249 314 MEP0765571.1 UPF0182 family protein [Fimbriimonadia bacterium] diamond 198 43.1 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia       Fimbriimonadia bacterium
32247975 32247975 PRJNA1010780_S_NODE_61798_length_152_cov_1.965812_g60509_i0 PRJNA1010780 61798 152 1.965812 2.98803424 Chthonomonadales bacterium 2282151 Bacteria Bacteria 47 3.39e-4   NR NLI01589.1 2282151 g60509 i0 48 0.986842105263158 50 26 98.7 0 1 150 181 230 NLI01589.1 cell wall anchor protein [Chthonomonadales bacterium] diamond 150 47 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
32469263 32469263 PRJNA1010780_S_NODE_29499_length_269_cov_2.495726_g28210_i0 PRJNA1010780 29499 269 2.495726 6.71350294 Armatimonadota bacterium 2033014 Bacteria Bacteria 54.7 2.44e-6   NR MDQ2799281.1 2033014 g28210 i0 36.9 0.936802973977695 84 40 92.6 3 269 21 6 77 MDQ2799281.1 alpha/beta hydrolase [Armatimonadota bacterium] diamond 252 54.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32564205 32564205 PRJNA1010780_S_NODE_26139_length_304_cov_1.215613_g24850_i0 PRJNA1010780 26139 304 1.215613 3.69546352 Armatimonadota bacterium 2033014 Bacteria Bacteria 158 9.42e-43   NR MBV9852567.1 2033014 g24850 i0 68.3 0.996710526315789 101 32 99.7 0 303 1 117 217 MBV9852567.1 SUMF1/EgtB/PvdO family nonheme iron enzyme [Armatimonadota bacterium] diamond 303 158 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32682172 32682172 PRJNA1010780_S_NODE_3320_length_1464_cov_6.892232_g2983_i0 PRJNA1010780 3320 1464 6.892232 100.90227648 Armatimonadota 67819 Bacteria Bacteria 288 2.35e-90   NR WP_221290249.1 685828 g2983 i0 51.3 3.95491803278689 273 114 52.9 2 1315 542 18 286 WP_221290249.1 phytanoyl-CoA dioxygenase family protein [Armatimonas rosea] diamond 5790 288 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
32689849 32689849 PRJNA1010780_S_NODE_43260_length_195_cov_1.106250_g41971_i0 PRJNA1010780 43260 195 1.10625 2.1571875 Capsulimonas sp. 2494211 Bacteria Bacteria 72.4 7.08e-13   NR WP_348222454.1 2494211 g41971 i0 42.9 1.07692307692308 70 34 98.5 1 4 195 214 283 WP_348222454.1 IPT/TIG domain-containing protein [Capsulimonas sp.] diamond 210 72.4 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;