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contig_metadata

7 rows where bioproject = "PRJNA1010780" and tax_clade = "delta/epsilon subdivisions"

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tax_superkingdom 1

tax_clade 1

  • delta/epsilon subdivisions · 7 ✖

bioproject 1

  • PRJNA1010780 · 7 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26869038 26869038 PRJNA1010780_S_NODE_56521_length_161_cov_1.722222_g55232_i0 PRJNA1010780 56521 161 1.722222 2.77277742 Bacteria 2 Bacteria Bacteria 71.2 1.07e-12   NR MFP4598292.1 2766932 g55232 i0 56.6 13.8260869565217 53 23 98.8 0 161 3 25 77 MFP4598292.1 SulP family inorganic anion transporter [Persicimonas sp.] diamond 2226 71.2 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Bradymonadaceae Persicimonas Persicimonas sp.
27097748 27097748 PRJNA1010780_S_NODE_26602_length_298_cov_2.311787_g25313_i0 PRJNA1010780 26602 298 2.311787 6.88912526 Persicimonas caeni 2292766 Bacteria Bacteria 90.5 5.12e-19   NR WP_141198619.1 2292766 g25313 i0 43.3 1.97315436241611 97 54 96.6 1 297 10 62 158 WP_141198619.1 DUF4419 domain-containing protein [Persicimonas caeni] diamond 588 90.5 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Bradymonadaceae Persicimonas Persicimonas caeni
29206227 29206227 PRJNA1010780_S_NODE_22809_length_349_cov_2.328025_g21520_i0 PRJNA1010780 22809 349 2.328025 8.12480725 Bacteria 2 Bacteria Bacteria 113 2.99e-27   NR WP_141198619.1 2292766 g21520 i0 47 1.98567335243553 117 61 99.7 1 348 1 66 182 WP_141198619.1 DUF4419 domain-containing protein [Persicimonas caeni] diamond 693 113 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Bradymonadaceae Persicimonas Persicimonas caeni
29932488 29932488 PRJNA1010780_S_NODE_23211_length_343_cov_1.152597_g21922_i0 PRJNA1010780 23211 343 1.152597 3.95340771 Bacteria 2 Bacteria Bacteria 85.5 6.02e-17   NR WP_141198619.1 2292766 g21922 i0 40.8 2.59766763848397 98 57 84.8 1 51 341 59 156 WP_141198619.1 DUF4419 domain-containing protein [Persicimonas caeni] diamond 891 85.9 0.9953434225844 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Bradymonadaceae Persicimonas Persicimonas caeni
30351171 30351171 PRJNA1010780_S_NODE_6652_length_1032_cov_32.076229_g5728_i1 PRJNA1010780 6652 1032 32.076229 331.02668328 Lujinxingiaceae bacterium 2946527 Bacteria Bacteria 147 3.02e-35   NR MBA2664773.1 2946527 g5728 i1 60.6 1.02906976744186 109 42 31.4 1 647 970 233 341 MBA2664773.1 S-layer homology domain-containing protein [Lujinxingiaceae bacterium] diamond 1062 147 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Lujinxingiaceae   Lujinxingiaceae bacterium
31638761 31638761 PRJNA1010780_S_NODE_23156_length_343_cov_3.967532_g21867_i0 PRJNA1010780 23156 343 3.967532 13.60863476 Myxococcota 2818505 Bacteria Bacteria 50.8 4.87e-5   NR MCH8886414.1 2024889 g21867 i0 33.7 1.59183673469388 92 53 74.3 3 341 87 24 114 MCH8886414.1 SRPBCC domain-containing protein [SAR324 cluster bacterium] diamond 546 51.2 0.9921875 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       SAR324 cluster bacterium
32437668 32437668 PRJNA1010780_S_NODE_31299_length_255_cov_2.054545_g30010_i0 PRJNA1010780 31299 255 2.054545 5.23908975 SAR324 cluster bacterium 2024889 Bacteria Bacteria 46.6 3.48e-4   NR MEE2715904.1 2024889 g30010 i0 75 0.282352941176471 24 6 28.2 0 4 75 10 33 MEE2715904.1 phosphatidylinositol kinase [SAR324 cluster bacterium] diamond 72 46.6 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       SAR324 cluster bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;