RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1010780", tax_clade = "Pithoviruses" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_clade 1

  • Pithoviruses · 2 ✖

bioproject 1

  • PRJNA1010780 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27855901 27855901 PRJNA1010780_S_NODE_58085_length_158_cov_2.089431_g56796_i0 PRJNA1010780 58085 158 2.089431 3.30130098 Pithovirus LCPAC2 2506592 Viruses Viruses 48.9 7.63e-5   NR QBK91240.1 2506592 g56796 i0 55 0.759493670886076 40 18 75.9 0 132 13 125 164 QBK91240.1 MAG: regulator of chromosome condensation protein, partial [Pithovirus LCPAC202] diamond 120 48.9 1 Viruses Pithoviruses             Pithovirus LCPAC202
29490064 29490064 PRJNA1010780_S_NODE_39230_length_210_cov_2.051429_g37941_i0 PRJNA1010780 39230 210 2.051429 4.3080009 Viruses 10239 Viruses Viruses 69.7 6.15e-12   NR SPN79882.1 2126979 g37941 i0 43.3 1.91428571428571 67 38 95.7 0 2 202 17 83 SPN79882.1 WD40-repeat domain-containing protein [Cedratvirus Zaza IHUMI] diamond 402 69.7 1 Viruses Pithoviruses             Cedratvirus Zaza IHUMI

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;