RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1010780", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1010780 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26781572 26781572 PRJNA1010780_S_NODE_50761_length_173_cov_2.094203_g49472_i0 PRJNA1010780 50761 173 2.094203 3.62297119 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 92.4 3.4e-20   NR MCZ7592406.1 2212473 g49472 i0 70.2 3.95375722543353 57 17 98.8 0 1 171 58 114 MCZ7592406.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Kiritimatiellia bacterium] diamond 684 92.4 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
31551787 31551787 PRJNA1010780_S_NODE_23716_length_334_cov_25.327759_g22427_i0 PRJNA1010780 23716 334 25.327759 84.59471506 Pontiella sulfatireligans 2750658 Bacteria Bacteria 56.6 3.64e-8   NR WP_136060343.1 2750658 g22427 i0 42.1 0.511976047904192 57 28 51.2 1 92 262 2 53 WP_136060343.1 YqaE/Pmp3 family membrane protein [Pontiella sulfatireligans] diamond 171 56.6 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Pontiellaceae Pontiella Pontiella sulfatireligans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;