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contig_metadata

13 rows where bioproject = "PRJNA1010780", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 13 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 13 ✖

bioproject 1

  • PRJNA1010780 · 13 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26591063 26591063 PRJNA1010780_S_NODE_12461_length_643_cov_2.791118_g11368_i0 PRJNA1010780 12461 643 2.791118 17.94688874 Criblamydia sequanensis 340071 Bacteria Bacteria 110 4.97e-25   NR WP_053332028.1 340071 g11368 i0 38.6 3.14463452566096 171 90 76 7 634 146 177 340 WP_053332028.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Criblamydia sequanensis] diamond 2022 110 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Criblamydiaceae Candidatus Criblamydia Candidatus Criblamydia sequanensis
27287482 27287482 PRJNA1010780_S_NODE_3963_length_1357_cov_19.229198_g3569_i0 PRJNA1010780 3963 1357 19.229198 260.94021686 Chlamydiota bacterium 2081524 Bacteria Bacteria 132 1.44e-31   NR MBM3207451.1 2081524 g3569 i0 29.8 2.80545320560059 258 174 56.6 5 131 898 15 267 MBM3207451.1 hypothetical protein [Chlamydiota bacterium] diamond 3807 132 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
27382332 27382332 PRJNA1010780_S_NODE_13443_length_600_cov_5.003540_g12297_i0 PRJNA1010780 13443 600 5.00354 30.02124 Chlamydiia bacterium 2052156 Bacteria Bacteria 111 8.759999999999999e-25   NR MCB1080710.1 2052156 g12297 i0 38 0.92 184 104 88 5 587 60 18 199 MCB1080710.1 GNAT family N-acetyltransferase [Chlamydiia bacterium] diamond 552 111 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
27698404 27698404 PRJNA1010780_S_NODE_30464_length_261_cov_2.300885_g29175_i0 PRJNA1010780 30464 261 2.300885 6.00530985 Simkania sp. 34094 Bacteria Bacteria 89 4.8e-20   NR MCB1068645.1 34094 g29175 i0 49.4 0.954022988505747 83 41 95.4 1 256 8 68 149 MCB1068645.1 methylated-DNA--[protein]-cysteine S-methyltransferase [Simkania sp.] diamond 249 89 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
27950650 27950650 PRJNA1010780_S_NODE_21425_length_373_cov_2.828402_g20136_i0 PRJNA1010780 21425 373 2.828402 10.54993946 Chlamydiota bacterium 2081524 Bacteria Bacteria 63.9 6.44e-9   NR MBI1870241.1 2081524 g20136 i0 35.8 0.85254691689008 106 59 80.4 3 365 66 794 896 MBI1870241.1 hypothetical protein [Chlamydiota bacterium] diamond 318 63.9 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28234581 28234581 PRJNA1010780_S_NODE_4226_length_1321_cov_20.125972_g3569_i1 PRJNA1010780 4226 1321 20.125972 265.86409012 Chlamydiota bacterium 2081524 Bacteria Bacteria 132 1.1799999999999999e-31   NR MBM3207451.1 2081524 g3569 i1 29.8 2.88190764572294 258 174 58.1 5 131 898 15 267 MBM3207451.1 hypothetical protein [Chlamydiota bacterium] diamond 3807 132 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
30066083 30066083 PRJNA1010780_S_NODE_24972_length_317_cov_3.372340_g23683_i0 PRJNA1010780 24972 317 3.37234 10.6903178 Chlamydiota bacterium 2081524 Bacteria Bacteria 72.8 1.99e-12   NR MBM3208169.1 2081524 g23683 i0 47 1.87381703470032 100 48 91.8 2 291 1 75 172 MBM3208169.1 hypothetical protein [Chlamydiota bacterium] diamond 594 72.8 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
30438047 30438047 PRJNA1010780_S_NODE_37013_length_220_cov_2.156757_g35724_i0 PRJNA1010780 37013 220 2.156757 4.7448654 root 1 Root_unresolved Root_unresolved 44.7 0.00571   NR MEC7840071.1 2081524 g35724 i0 47.2 2.60454545454545 53 26 69.5 1 155 3 835 887 MEC7840071.1 hypothetical protein [Chlamydiota bacterium] diamond 573 44.7 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
30887762 30887762 PRJNA1010780_S_NODE_9754_length_786_cov_3.171771_g8824_i0 PRJNA1010780 9754 786 3.171771 24.93012006 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 195 1.19e-57   NR MEI8365875.1 2052176 g8824 i0 44.6 0.881679389312977 231 120 86.3 4 786 109 44 271 MEI8365875.1 hypothetical protein [Parachlamydiaceae bacterium] diamond 693 195 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
30982611 30982611 PRJNA1010780_S_NODE_17674_length_459_cov_2.530660_g16401_i0 PRJNA1010780 17674 459 2.53066 11.6157294 Parachlamydia sp. 2052048 Bacteria Bacteria 172 1.35e-49   NR MCE5317616.1 2052048 g16401 i0 51.6 3.93464052287582 153 74 100 0 1 459 74 226 MCE5317616.1 malate dehydrogenase [Parachlamydia sp.] diamond 1806 172 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Parachlamydia Parachlamydia sp.
30982663 30982663 PRJNA1010780_S_NODE_35394_length_228_cov_2.932642_g34105_i0 PRJNA1010780 35394 228 2.932642 6.68642376 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 94.7 1.0100000000000002e-21   NR HEY2811061.1 2047756 g34105 i0 51.3 1 76 37 100 0 1 228 46 121 HEY2811061.1 cyclase family protein [Rhabdochlamydiaceae bacterium] diamond 228 94.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
31266973 31266973 PRJNA1010780_S_NODE_46755_length_183_cov_4.182432_g45466_i0 PRJNA1010780 46755 183 4.182432 7.65385056 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 81.6 2.92e-16   NR HEV8052334.1 2052176 g45466 i0 66.7 1.9672131147541 60 18 98.4 1 181 2 13 70 HEV8052334.1 L-serine ammonia-lyase [Parachlamydiaceae bacterium] diamond 360 81.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
31867754 31867754 PRJNA1010780_S_NODE_37017_length_220_cov_2.124324_g35728_i0 PRJNA1010780 37017 220 2.124324 4.6735128 Chlamydia serpentis 1967782 Bacteria Bacteria 81.6 4.25e-16   NR WP_108896745.1 1967782 g35728 i0 50 2.78181818181818 70 35 95.5 0 4 213 271 340 WP_108896745.1 phosphoglycerate kinase [Chlamydia serpentis] diamond 612 81.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia serpentis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;