RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJNA1010780", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 9 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 9 ✖

bioproject 1

  • PRJNA1010780 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6104727 6104727 PRJNA1010780_S_NODE_59465_length_156_cov_1.512397_g58176_i0 PRJNA1010780 59465 156 1.512397 2.35933932 Fidelibacterota bacterium 2026760 Bacteria Bacteria 80.9 4.2e-16   NR MAP02744.1 2026760 g58176 i0 67.3 10 52 17 100 0 156 1 332 383 MAP02744.1 acetate--CoA ligase [Fidelibacterota bacterium] diamond 1560 80.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27002765 27002765 PRJNA1010780_S_NODE_34022_length_236_cov_2.348259_g32733_i0 PRJNA1010780 34022 236 2.348259 5.54189124 Fidelibacterota bacterium 2026760 Bacteria Bacteria 63.9 1.18e-9   NR MCF7808221.1 2026760 g32733 i0 51.3 0.991525423728814 78 36 96.6 1 9 236 1277 1354 MCF7808221.1 choice-of-anchor D domain-containing protein [Fidelibacterota bacterium] diamond 234 63.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27666604 27666604 PRJNA1010780_S_NODE_2104_length_1763_cov_7.793403_g1866_i0 PRJNA1010780 2104 1763 7.793403 137.39769489 Fidelibacterota bacterium 2026760 Bacteria Bacteria 55.1 0.00113   NR MDP6275611.1 2026760 g1866 i0 32.9 0.547929665343165 161 101 27.1 5 1125 1601 106 261 MDP6275611.1 right-handed parallel beta-helix repeat-containing protein [Fidelibacterota bacterium] diamond 966 55.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28013917 28013917 PRJNA1010780_S_NODE_14205_length_572_cov_4.055866_g13023_i0 PRJNA1010780 14205 572 4.055866 23.19955352 Fidelibacterota bacterium 2026760 Bacteria Bacteria 198 1.25e-56   NR MEC7850511.1 2026760 g13023 i0 48.7 8.8479020979021 189 97 99.1 0 571 5 128 316 MEC7850511.1 family 1 glycosylhydrolase [Fidelibacterota bacterium] diamond 5061 198 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29592066 29592066 PRJNA1010780_S_NODE_23650_length_335_cov_5.056667_g22361_i0 PRJNA1010780 23650 335 5.056667 16.93983445 Fidelibacterota bacterium 2026760 Bacteria Bacteria 130 8.32e-33   NR MEC7850511.1 2026760 g22361 i0 55 3.9044776119403 109 49 97.6 0 2 328 312 420 MEC7850511.1 family 1 glycosylhydrolase [Fidelibacterota bacterium] diamond 1308 130 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29686906 29686906 PRJNA1010780_S_NODE_34190_length_235_cov_2.300000_g32901_i0 PRJNA1010780 34190 235 2.3 5.405 Fidelibacterota bacterium 2026760 Bacteria Bacteria 44.7 0.00676   NR MBI64876.1 2026760 g32901 i0 66.7 0.663829787234043 27 9 34.5 0 1 81 289 315 MBI64876.1 peptidylprolyl isomerase [Fidelibacterota bacterium] diamond 156 44.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29837396 29837396 PRJNA1010780_S_NODE_13611_length_594_cov_3.220036_g12455_i0 PRJNA1010780 13611 594 3.220036 19.12701384 root 1 Root_unresolved Root_unresolved 51.6 6.74e-4   NR RKY61686.1 2026760 g12455 i0 34.6 1.93939393939394 107 58 48 3 202 486 114 220 RKY61686.1 MAG: hypothetical protein DRP96_02435 [Fidelibacterota bacterium] diamond 1152 51.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30666419 30666419 PRJNA1010780_S_NODE_15013_length_542_cov_4.475345_g13804_i0 PRJNA1010780 15013 542 4.475345 24.2563699 Fidelibacterota bacterium 2026760 Bacteria Bacteria 73.9 1.42e-13   NR MBD23748.1 2026760 g13804 i0 42 0.553505535055351 100 56 55.4 2 503 204 6 103 MBD23748.1 hypothetical protein [Fidelibacterota bacterium] diamond 300 73.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31607279 31607279 PRJNA1010780_S_NODE_30556_length_260_cov_3.684444_g29267_i0 PRJNA1010780 30556 260 3.684444 9.5795544 Bacteria 2 Bacteria Bacteria 55.8 9.17e-7   NR MCH8300687.1 2026760 g29267 i0 42 5.50384615384615 81 34 91.2 4 239 3 36 105 MCH8300687.1 LD-carboxypeptidase [Fidelibacterota bacterium] diamond 1431 55.8 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;