RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1010780", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1010780 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26876710 26876710 PRJNA1010780_S_NODE_47401_length_182_cov_1.455782_g46112_i0 PRJNA1010780 47401 182 1.455782 2.64952324 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 71.6 9.63e-13   NR AXA35161.1 2250252 g46112 i0 55.2 1.91208791208791 58 26 95.6 0 174 1 158 215 AXA35161.1 Translation elongation factor Tu [Candidatus Sumerlaea chitinivorans] diamond 348 71.6 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
28550764 28550764 PRJNA1010780_S_NODE_39407_length_209_cov_2.568966_g38118_i0 PRJNA1010780 39407 209 2.568966 5.36913894 Candidatus Sumerlaeia bacterium 2715255 Bacteria Bacteria 42.7 0.0242   NR MFP4580874.1 2715255 g38118 i0 41.2 0.976076555023923 68 38 97.6 1 3 206 110 175 MFP4580874.1 glycosyltransferase family 4 protein [Candidatus Sumerlaeia bacterium] diamond 204 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia       Candidatus Sumerlaeia bacterium
32057723 32057723 PRJNA1010780_S_NODE_5018_length_1214_cov_4.909245_g4521_i0 PRJNA1010780 5018 1214 4.909245 59.5982343 Candidatus Sumerlaeota bacterium 2107588 Bacteria Bacteria 423 3.5499999999999993e-143   NR MCC7391069.1 2107588 g4521 i0 52.3 1.92751235584843 390 172 95.9 6 1200 37 19 396 MCC7391069.1 AGE family epimerase/isomerase [Candidatus Sumerlaeota bacterium] diamond 2340 423 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota         Candidatus Sumerlaeota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;