RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1010780", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1010780 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28771481 28771481 PRJNA1010780_S_NODE_23227_length_342_cov_3.570033_g21938_i0 PRJNA1010780 23227 342 3.570033 12.20951286 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 101 6.709999999999999e-23   NR MFC1715018.1 2026781 g21938 i0 46.9 2.57894736842105 98 51 86 1 337 44 62 158 MFC1715018.1 alpha/beta hydrolase [Candidatus Poribacteria bacterium] diamond 882 101 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30856082 30856082 PRJNA1010780_S_NODE_43294_length_194_cov_3.000000_g42005_i0 PRJNA1010780 43294 194 3 5.82 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 48.9 1.28e-4   NR MDA1190769.1 2026781 g42005 i0 41 0.943298969072165 61 36 94.3 0 192 10 384 444 MDA1190769.1 response regulator [Candidatus Poribacteria bacterium] diamond 183 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;