RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1010780", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1010780 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27476973 27476973 PRJNA1010780_S_NODE_23943_length_331_cov_2.750000_g22654_i0 PRJNA1010780 23943 331 2.75 9.1025 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 55.8 2.72e-6   NR MDR0591100.1 2052152 g22654 i0 32.1 0.987915407854985 109 71 97 2 325 5 317 424 MDR0591100.1 IPT/TIG domain-containing protein [Candidatus Nomurabacteria bacterium] diamond 327 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
30729656 30729656 PRJNA1010780_S_NODE_23014_length_345_cov_9.822581_g21725_i0 PRJNA1010780 23014 345 9.822581 33.88790445 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 47.8 0.00173   NR MCB9816650.1 2052152 g21725 i0 35.1 0.669565217391304 77 46 64.3 3 293 72 202 277 MCB9816650.1 hypothetical protein [Candidatus Nomurabacteria bacterium] diamond 231 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;