RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1010662" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1010662 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27382299 27382299 PRJNA1010662_P_NODE_14263_length_166_cov_0.880342_g14204_i0 PRJNA1010662 14263 166 0.880342 1.46136772 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 88.6 8.18e-19   NR KAJ4458739.1 342808 g14204 i0 74.1 69.5602409638554 54 14 97.6 0 163 2 188 241 KAJ4458739.1 putative 60S ribosomal protein L5 [Paratrimastix pyriformis] diamond 11547 88.6 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
30192438 30192438 PRJNA1010662_P_NODE_8512_length_196_cov_1.142857_g8453_i0 PRJNA1010662 8512 196 1.142857 2.23999972 Streblomastix strix 222440 Preaxostyla other_Eukaryota 70.1 4.59e-13   NR KAA6388004.1 222440 g8453 i0 60.4 0.811224489795918 53 20 81.1 1 2 160 115 166 KAA6388004.1 MAG: putative Translationally-controlled tumor protein [Streblomastix strix] diamond 159 70.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
31266876 31266876 PRJNA1010662_P_NODE_4415_length_252_cov_1.532020_g4356_i0 PRJNA1010662 4415 252 1.53202 3.8606904 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 44.7 0.00838   NR KAK2959446.1 2049346 g4356 i0 45.5 0.523809523809524 44 21 48.8 1 70 192 98 141 KAK2959446.1 hypothetical protein BLNAU_5495 [Blattamonas nauphoetae] diamond 132 44.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;