RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1010662", tax_phylum = "Nanobdellota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nanobdellota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1010662 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28045213 28045213 PRJNA1010662_P_NODE_14405_length_166_cov_0.863248_g14346_i0 PRJNA1010662 14405 166 0.863248 1.43299168 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 62.4 1.47e-9   NR MDP6845833.1 2910166 g14346 i0 54 4.64457831325301 50 23 90.4 0 164 15 60 109 MDP6845833.1 IMP dehydrogenase [Candidatus Nanoarchaeia archaeon] diamond 771 62.4 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
31361886 31361886 PRJNA1010662_P_NODE_5856_length_225_cov_1.880682_g5797_i0 PRJNA1010662 5856 225 1.880682 4.2315345 Nanobdellota archaeon 2026764 Archaea Archaea 48.9 7.8e-5   NR MEK6940883.1 2026764 g5797 i0 44.2 1.34666666666667 52 27 66.7 2 223 74 85 136 MEK6940883.1 hypothetical protein [Nanoarchaeota archaeon] diamond 303 48.9 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;