RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1010662" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1010662 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2705073 2705073 PRJNA1010662_P_NODE_10863_length_178_cov_2.286822_g10804_i0 PRJNA1010662 10863 178 2.286822 4.07054316 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 52.8 0.015   NTclustered gi|1958088527|gb|CP065001.1| 2049428 g10804 i0 100 0.157303370786517 28 0 16 0 42 69 2344952 2344925 Ignavibacteriales bacterium isolate Kalu_18-Q3-R12-55_MAXAC.127v2 chromosome, complete genome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
27729889 27729889 PRJNA1010662_P_NODE_14264_length_166_cov_0.880342_g14205_i0 PRJNA1010662 14264 166 0.880342 1.46136772 Ignavibacteria bacterium 2053306 Bacteria Bacteria 43.9 0.00523   NR MCI0472683.1 2053306 g14205 i0 43.9 2.47590361445783 41 23 74.1 0 2 124 491 531 MCI0472683.1 tetratricopeptide repeat protein [Ignavibacteria bacterium] diamond 411 43.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
28826899 28826899 PRJNA1010662_P_NODE_13468_length_167_cov_0.881356_g13409_i0 PRJNA1010662 13468 167 0.881356 1.47186452 Pseudomonadati 3379134 Bacteria Bacteria 51.2 1.29e-5   NR MBK7985826.1 2053306 g13409 i0 48.3 2.08383233532934 58 26 97 2 167 6 79 136 MBK7985826.1 hypothetical protein [Ignavibacteria bacterium] diamond 348 51.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30975036 30975036 PRJNA1010662_P_NODE_3794_length_268_cov_2.255708_g3735_i0 PRJNA1010662 3794 268 2.255708 6.04529744 Melioribacter 1134403 Bacteria Bacteria 89 8.01e-19   NR MCX6174980.1 2049428 g3735 i0 45.5 1.97014925373134 88 46 98.5 1 268 5 128 213 MCX6174980.1 fatty acid desaturase [Ignavibacteriales bacterium] diamond 528 89 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;