RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA1010662" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA1010662 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26781454 26781454 PRJNA1010662_P_NODE_1261_length_455_cov_2.610837_g1202_i0 PRJNA1010662 1261 455 2.610837 11.87930835 Kipferlia bialata 797122 Fornicata other_Eukaryota 60.1 3.47e-7   NR GIQ80339.1 797122 g1202 i0 31.9 0.784615384615385 119 72 72.5 2 39 368 2887 3005 GIQ80339.1 hypothetical protein KIPB_001119, partial [Kipferlia bialata] diamond 357 60.1 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
28574450 28574450 PRJNA1010662_P_NODE_5087_length_238_cov_1.100529_g5028_i0 PRJNA1010662 5087 238 1.100529 2.61925902 Geminigeraceae 589343 Fornicata other_Eukaryota 45.1 0.00562   NR GIQ80339.1 797122 g5028 i0 60 1.32352941176471 30 12 37.8 0 238 149 2719 2748 GIQ80339.1 hypothetical protein KIPB_001119, partial [Kipferlia bialata] diamond 315 45.1 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
29971320 29971320 PRJNA1010662_P_NODE_1431_length_426_cov_3.257294_g1372_i0 PRJNA1010662 1431 426 3.257294 13.87607244 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 99.4 6.05e-22   NR KAG9391426.1 201153 g1372 i0 48.1 1.47183098591549 104 43 73.2 1 318 7 12 104 KAG9391426.1 Hydrogenosomal membrane protein 31-like [Carpediemonas membranifera] diamond 627 99.4 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
30445428 30445428 PRJNA1010662_P_NODE_16073_length_163_cov_0.912281_g16014_i0 PRJNA1010662 16073 163 0.912281 1.48701803 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 53.1 2.27e-7   NR GKT25222.1 2918883 g16014 i0 60.5 0.791411042944785 43 14 79.1 1 2 130 39 78 GKT25222.1 Sdc1/DPY30 like protein [Aduncisulcus paluster] diamond 129 53.1 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
31488473 31488473 PRJNA1010662_P_NODE_476_length_715_cov_2.352853_g426_i0 PRJNA1010662 476 715 2.352853 16.82289895 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 214 4.26e-65   NR KAG9396194.1 201153 g426 i0 51.2 4.42657342657343 211 95 88.5 1 74 706 1 203 KAG9396194.1 Ribosomal protein L10/acidic P0 [Carpediemonas membranifera] diamond 3165 214 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;