RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1010662" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1010662 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26773887 26773887 PRJNA1010662_P_NODE_13161_length_168_cov_0.865546_g13102_i0 PRJNA1010662 13161 168 0.865546 1.45411728 Bacteria 2 Bacteria Bacteria 56.2 2.41e-7   NR MBI4552859.1 2053570 g13102 i0 57.1 3.94642857142857 56 23 100 1 168 1 131 185 MBI4552859.1 choice-of-anchor D domain-containing protein [Candidatus Latescibacterota bacterium] diamond 663 56.6 0.992932862190813 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
30792752 30792752 PRJNA1010662_P_NODE_2474_length_326_cov_2.570397_g2415_i0 PRJNA1010662 2474 326 2.570397 8.37949422 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 55.5 1.19e-7   NR MFT5104248.1 2053570 g2415 i0 40.6 0.588957055214724 64 38 58.9 0 320 129 4 67 MFT5104248.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 192 55.5 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;