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contig_metadata

10 rows where bioproject = "PRJNA1010662", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 10 ✖

tax_kingdom 1

  • Pseudomonadati · 10 ✖

bioproject 1

  • PRJNA1010662 · 10 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26781470 26781470 PRJNA1010662_P_NODE_6841_length_213_cov_0.939024_g6782_i0 PRJNA1010662 6841 213 0.939024 2.00012112 Candidatus Magnetoglobus multicellularis str. Araruama 890399 Bacteria Bacteria 62 4.24e-9   NR ETR72215.1 890399 g6782 i0 46.5 1 71 34 94.4 1 213 13 2585 2655 ETR72215.1 MAG: hypothetical protein OMM_01891 [Candidatus Magnetoglobus multicellularis str. Araruama] diamond 213 62 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Candidatus Magnetoglobus Candidatus Magnetoglobus multicellularis
28108259 28108259 PRJNA1010662_P_NODE_5805_length_226_cov_1.519774_g5746_i0 PRJNA1010662 5805 226 1.519774 3.43468924 Solidesulfovibrio carbinoliphilus 345370 Bacteria Bacteria 42.7 0.0294   NR WP_009181637.1 345370 g5746 i0 34.4 1.63274336283186 64 41 85 1 209 18 634 696 WP_009181637.1 histidine kinase dimerization/phosphoacceptor domain -containing protein [Solidesulfovibrio carbinoliphilus] diamond 369 42.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Solidesulfovibrio Solidesulfovibrio carbinoliphilus
28164139 28164139 PRJNA1010662_P_NODE_10085_length_184_cov_1.155556_g10026_i0 PRJNA1010662 10085 184 1.155556 2.12622304 Pseudodesulfovibrio 2035811 Bacteria Bacteria 53.5 2.66e-6   NR WP_151151543.1 1721087 g10026 i0 63.6 11.2663043478261 33 12 53.8 0 100 2 3 35 WP_151151543.1 molecular chaperone HtpG [Pseudodesulfovibrio senegalensis] diamond 2073 53.9 0.992578849721707 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Pseudodesulfovibrio Pseudodesulfovibrio senegalensis
28424279 28424279 PRJNA1010662_P_NODE_13766_length_167_cov_0.864407_g13707_i0 PRJNA1010662 13766 167 0.864407 1.44355969 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 72 6.06e-13   NR MDH3956896.1 2049433 g13707 i0 61.1 0.970059880239521 54 21 97 0 163 2 139 192 MDH3956896.1 aldehyde dehydrogenase family protein [Desulfobacteraceae bacterium] diamond 162 72 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
28448435 28448435 PRJNA1010662_P_NODE_5566_length_230_cov_1.143646_g5507_i0 PRJNA1010662 5566 230 1.143646 2.6303858 Pseudomonadati 3379134 Bacteria Bacteria 69.3 1.35e-11   NR HIQ37704.1 65555 g5507 i0 66 9.31304347826087 47 16 61.3 0 228 88 528 574 HIQ37704.1 endopeptidase La [Desulfocapsa sulfexigens] diamond 2142 69.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfocapsaceae Desulfocapsa Desulfocapsa sulfexigens
29497659 29497659 PRJNA1010662_P_NODE_8190_length_199_cov_1.373333_g8131_i0 PRJNA1010662 8190 199 1.373333 2.73293267 Desulfobacterales bacterium 2044940 Bacteria Bacteria 97.4 9.87e-22   NR MCG8566149.1 2044940 g8131 i0 64.6 9.78391959798995 65 23 98 0 198 4 268 332 MCG8566149.1 aldehyde dehydrogenase family protein [Desulfobacterales bacterium] diamond 1947 97.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
30343522 30343522 PRJNA1010662_P_NODE_15572_length_164_cov_0.895652_g15513_i0 PRJNA1010662 15572 164 0.895652 1.46886928 Pseudomonadati 3379134 Bacteria Bacteria 51.2 1.3e-5   NR SPD73104.1 201089 g15513 i0 48 9.65853658536585 50 26 91.5 0 163 14 444 493 SPD73104.1 Calcium-transporting ATPase [uncultured Desulfobacterium sp.] diamond 1584 51.6 0.992248062015504 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteriaceae Desulfobacterium uncultured Desulfobacterium sp.
30666379 30666379 PRJNA1010662_P_NODE_14113_length_166_cov_0.888889_g14054_i0 PRJNA1010662 14113 166 0.888889 1.47555574 Syntrophorhabdus sp. PtaB.Bin 2699756 Bacteria Bacteria 61.2 3.8e-9   NR OPY01682.1 1811700 g14054 i0 56.3 1.73493975903614 48 21 86.7 0 152 9 638 685 OPY01682.1 MAG: Prenyltransferase and squalene oxidase repeat protein [Syntrophorhabdus sp. PtaB.Bin047] diamond 288 61.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophorhabdia Syntrophorhabdales Syntrophorhabdaceae Syntrophorhabdus Syntrophorhabdus sp. PtaB.Bin047
30729609 30729609 PRJNA1010662_P_NODE_4474_length_251_cov_1.004950_g4415_i0 PRJNA1010662 4474 251 1.00495 2.5224245 Desulfovibrio sp. 885 Bacteria Bacteria 43.1 0.0301   NR MDR1776801.1 885 g4415 i0 34.2 0.944223107569721 79 44 86.1 3 246 31 492 569 MDR1776801.1 amylo-alpha-1,6-glucosidase [Desulfovibrio sp.] diamond 237 43.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio sp.
31132569 31132569 PRJNA1010662_P_NODE_16615_length_162_cov_0.920354_g16556_i0 PRJNA1010662 16615 162 0.920354 1.49097348 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 49.3 4.16e-5   NR MBP1752792.1 2282154 g16556 i0 37.7 1.90740740740741 53 33 98.1 0 162 4 133 185 MBP1752792.1 SCP-like extracellular lipoprotein [Geobacteraceae bacterium] diamond 309 49.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae   Geobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;