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contig_metadata

11 rows where bioproject = "PRJNA1010662" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 11 ✖

bioproject 1

  • PRJNA1010662 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5257800 5257800 PRJNA1010662_P_NODE_1905_length_367_cov_1.160377_g1846_i0 PRJNA1010662 1905 367 1.160377 4.25858359 Natrinema pallidum 69527 Archaea Archaea 52.8 0.035   NTclustered gi|1674552828|gb|CP040639.1| 69527 g1846 i0 100 0.152588555858311 28 0 8 0 240 267 4328 4301 Natrinema pallidum strain BOL6-1 plasmid pNPA70, complete sequence blastn 56 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema pallidum
5257850 5257850 PRJNA1010662_P_NODE_7685_length_203_cov_2.616883_g7626_i0 PRJNA1010662 7685 203 2.616883 5.31227249 Haloarcula litorea 3032579 Archaea Archaea 52.8 0.018   NTclustered gi|2463595526|gb|CP119779.1| 3032579 g7626 i0 100 0.137931034482759 28 0 14 0 165 192 2182480 2182507 Haloarcula litorea strain GDY20 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula litorea
9082399 9082399 PRJNA1010662_P_NODE_368_length_814_cov_2.708497_g326_i0 PRJNA1010662 368 814 2.708497 22.04716558 Methanosarcinales archaeon 2250255 Archaea Archaea 520 2.849999999999999e-183   NR RYE83110.1 2250255 g326 i0 93.7 0.998771498771499 271 17 99.9 0 2 814 80 350 RYE83110.1 MAG: translation elongation factor EF-1 subunit alpha, partial [Methanosarcinales archaeon] diamond 813 520 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
27248300 27248300 PRJNA1010662_P_NODE_16103_length_163_cov_0.903509_g16044_i0 PRJNA1010662 16103 163 0.903509 1.47271967 root 1 Root_unresolved Root_unresolved 46.6 5.57e-4   NR WP_405290924.1 66852 g16044 i0 46.3 3.84662576687117 54 28 99.4 1 162 1 499 551 WP_405290924.1 TLD domain-containing protein, partial [Methanobrevibacter sp.] diamond 627 46.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
28226951 28226951 PRJNA1010662_P_NODE_9786_length_186_cov_1.401460_g9727_i0 PRJNA1010662 9786 186 1.40146 2.6067156 root 1 Root_unresolved Root_unresolved 44.7 0.00192   NR MBT3600433.1 2026739 g9727 i0 51.2 3.87096774193548 41 15 66.1 1 51 173 3 38 MBT3600433.1 PaaI family thioesterase [Methanobacteriota archaeon] diamond 720 45.1 0.991130820399113 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28424280 28424280 PRJNA1010662_P_NODE_14766_length_165_cov_0.896552_g14707_i0 PRJNA1010662 14766 165 0.896552 1.4793108 Methanorbis rubei 3028300 Archaea Archaea 60.8 5.38e-9   NR WP_338096598.1 3028300 g14707 i0 55.8 1.89090909090909 52 23 94.5 0 165 10 171 222 WP_338096598.1 ribosome biogenesis/translation initiation ATPase RLI [Methanorbis rubei] diamond 312 60.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanorbis Methanorbis rubei
28676879 28676879 PRJNA1010662_P_NODE_9267_length_190_cov_0.929078_g9208_i0 PRJNA1010662 9267 190 0.929078 1.7652482 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 48.5 1.34e-4   NR MCZ7391777.1 2032688 g9208 i0 39.3 0.884210526315789 56 33 88.4 1 2 169 33 87 MCZ7391777.1 SDR family oxidoreductase [Candidatus Methanoperedens sp.] diamond 168 48.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
29055763 29055763 PRJNA1010662_P_NODE_14708_length_165_cov_0.896552_g14649_i0 PRJNA1010662 14708 165 0.896552 1.4793108 Euryarchaeota archaeon TMED192 1986689 Archaea Archaea 69.7 4.06e-12   NR RPG73185.1 1986689 g14649 i0 60 4.98181818181818 55 22 100 0 165 1 16 70 RPG73185.1 MAG: L-glutamate gamma-semialdehyde dehydrogenase [Euryarchaeota archaeon TMED192] diamond 822 69.7 1 Archaea   Methanobacteriati Methanobacteriota         Euryarchaeota archaeon TMED192
30500989 30500989 PRJNA1010662_P_NODE_5013_length_239_cov_1.615789_g4954_i0 PRJNA1010662 5013 239 1.615789 3.86173571 root 1 Root_unresolved Root_unresolved 98.6 7.91e-22   NR RZD41892.1 2026739 g4954 i0 56 3.84100418410042 75 33 94.1 0 228 4 356 430 RZD41892.1 MAG: hypothetical protein CXT73_04210 [Methanobacteriota archaeon] diamond 918 98.6 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31171701 31171701 PRJNA1010662_P_NODE_11975_length_171_cov_2.377049_g11916_i0 PRJNA1010662 11975 171 2.377049 4.06475379 Halogeometricum borinquense 60847 Archaea Archaea 42.4 0.0197   NR WP_174261571.1 60847 g11916 i0 44.4 0.789473684210526 45 25 78.9 0 1 135 202 246 WP_174261571.1 signal peptide peptidase SppA [Halogeometricum borinquense] diamond 135 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halogeometricum Halogeometricum borinquense
32878715 32878715 PRJNA1010662_P_NODE_8760_length_193_cov_2.055556_g8701_i0 PRJNA1010662 8760 193 2.055556 3.96722308 Methanobrevibacter sp. 66852 Archaea Archaea 76.3 2.9e-14   NR MBO7518105.1 66852 g8701 i0 58 0.77720207253886 50 19 74.6 1 1 144 428 477 MBO7518105.1 hypothetical protein [Methanobrevibacter sp.] diamond 150 76.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;