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contig_metadata

29 rows where bioproject = "PRJNA1010662", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 29 ✖

tax_kingdom 1

  • Metazoa · 29 ✖

tax_clade 1

bioproject 1

  • PRJNA1010662 · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
155002 155002 PRJNA1010662_S_NODE_2741_length_200_cov_4.554140_g2696_i0 PRJNA1010662 2741 200 4.55414 9.10828 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 359 9.14e-95   NTclustered gi|28273263|gb|AY157151.1| 52061 g2696 i0 99 40.48 200 2 100 0 1 200 1819 2018 Stenostomum leucops 28S large subunit ribosomal RNA gene, partial sequence blastn 8096 359 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
3552054 3552054 PRJNA1010662_S_NODE_303_length_482_cov_3.394077_g260_i0 PRJNA1010662 303 482 3.394077 16.35945114 Stenostomum 39238 Platyhelminthes Platyhelminthes 874 0   NTclustered gi|209968685|gb|FJ384848.1| 52061 g260 i0 99.378 65.8879668049793 482 3 100 0 1 482 323 804 Stenostomum leucops isolate K04_75 28S ribosomal RNA gene, partial sequence blastn 31758 874 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
5257874 5257874 PRJNA1010662_S_NODE_1765_length_237_cov_2.206186_g1720_i0 PRJNA1010662 1765 237 2.206186 5.22866082 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 394 3.069999999999999e-105   NTclustered gi|926460157|gb|KR132223.1| 282301 g1720 i0 97.403 0.974683544303797 231 6 97 0 7 237 532 302 Macrostomum lignano clone c100550_g1_i1 mRNA sequence blastn 231 394 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
5257888 5257888 PRJNA1010662_S_NODE_3805_length_175_cov_4.356061_g3760_i0 PRJNA1010662 3805 175 4.356061 7.62310675 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 292 7.98e-75   NTclustered gi|209968753|gb|FJ384954.1| 52061 g3760 i0 97.11 94.5657142857143 173 5 99 0 1 173 695 523 Stenostomum leucops isolate K05_264 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 16549 292 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
6104665 6104665 PRJNA1010662_S_NODE_4225_length_168_cov_1.576000_g4180_i0 PRJNA1010662 4225 168 1.576 2.64768 Macrostomum 39217 Platyhelminthes Platyhelminthes 294 2.12e-75   NTclustered gi|1095468141|gb|KY008502.1| 1914034 g4180 i0 98.214 99.9107142857143 168 3 100 0 1 168 51 218 Macrostomum qiaochengensis isolate FCY-6 28S ribosomal RNA gene, partial sequence blastn 16785 294 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum qiaochengensis
9082471 9082471 PRJNA1010662_S_NODE_1888_length_231_cov_1.750000_g1843_i0 PRJNA1010662 1888 231 1.75 4.0425 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 405 1.38e-108   NTclustered gi|28273263|gb|AY157151.1| 52061 g1843 i0 98.268 64.3203463203463 231 4 100 0 1 231 2494 2264 Stenostomum leucops 28S large subunit ribosomal RNA gene, partial sequence blastn 14858 405 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
11204769 11204769 PRJNA1010662_S_NODE_2869_length_197_cov_4.915584_g2824_i0 PRJNA1010662 2869 197 4.915584 9.68370048 Stenostomum 39238 Platyhelminthes Platyhelminthes 348 1.94e-91   NTclustered gi|209968707|gb|FJ384870.1| 52061 g2824 i0 98.974 68.5989847715736 195 1 98 1 4 197 262 68 Stenostomum leucops isolate K05_55 28S ribosomal RNA gene, partial sequence blastn 13514 348 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
13754838 13754838 PRJNA1010662_P_NODE_2031_length_356_cov_2.482085_g1972_i0 PRJNA1010662 2031 356 2.482085 8.8362226 Plagiostomidae 79797 Platyhelminthes Platyhelminthes 56.5 0.003   NTclustered gi|28273270|gb|AY157158.1| 86115 g1972 i0 97.059 7.99438202247191 34 0 9 1 1 33 3240 3273 Plicastoma cuticulata 28S large subunit ribosomal RNA gene, partial sequence blastn 2846 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Prolecithophora Plagiostomidae Plicastoma Plicastoma cuticulata
15457585 15457585 PRJNA1010662_S_NODE_3433_length_183_cov_2.685714_g3388_i0 PRJNA1010662 3433 183 2.685714 4.91485662 Macrostomum sp. 36 JNB-2019 2614341 Platyhelminthes Platyhelminthes 279 6.57e-71   NTclustered gi|1837893144|gb|MT428645.1| 2614341 g3388 i0 100 83.0382513661202 151 0 83 0 33 183 758 608 Macrostomum sp. 36 JNB-2019 voucher MTP_LS_3344 large subunit ribosomal RNA gene, partial sequence blastn 15196 279 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum sp. 36 JNB-2019
16304005 16304005 PRJNA1010662_S_NODE_4693_length_161_cov_1.127119_g4648_i0 PRJNA1010662 4693 161 1.127119 1.81466159 Macrostomum 39217 Platyhelminthes Platyhelminthes 291 2.6e-74   NTclustered gi|1837893536|gb|MT429037.1| 683713 g4648 i0 99.375 99.3788819875776 160 1 99 0 1 160 812 971 Macrostomum longituba voucher MTP_LS_3284 large subunit ribosomal RNA gene, partial sequence blastn 16000 291 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum longituba
17579381 17579381 PRJNA1010662_S_NODE_814_length_323_cov_2.182143_g769_i0 PRJNA1010662 814 323 2.182143 7.04832189 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 597 3.11e-166   NTclustered gi|210148296|gb|FJ384826.1| 52061 g769 i0 100 97.2352941176471 323 0 100 0 1 323 357 35 Stenostomum leucops isolate K05_26 18S ribosomal RNA gene, partial sequence blastn 31407 597 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
18006693 18006693 PRJNA1010662_P_NODE_675_length_606_cov_4.052065_g619_i0 PRJNA1010662 675 606 4.052065 24.5555139 root 1 Root_unresolved Root_unresolved 210 3.46e-63   NR CUU98813.1 85433 g619 i0 56.5 14.7079207920792 200 78 94.6 2 606 34 173 372 CUU98813.1 hypothetical transcript [Hymenolepis microstoma] diamond 8913 210 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
19280467 19280467 PRJNA1010662_P_NODE_6436_length_217_cov_2.160714_g6377_i0 PRJNA1010662 6436 217 2.160714 4.68874938 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 116 2.94e-31   NR PAA86685.1 282301 g6377 i0 73.9 19.0506912442396 69 18 95.4 0 9 215 79 147 PAA86685.1 hypothetical protein BOX15_Mlig021346g2 [Macrostomum lignano] diamond 4134 117 0.991452991452991 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
19280532 19280532 PRJNA1010662_S_NODE_4816_length_159_cov_1.974138_g4771_i0 PRJNA1010662 4816 159 1.974138 3.13887942 Macrostomum qiaochengensis 1914034 Platyhelminthes Platyhelminthes 279 5.55e-71   NTclustered gi|1095468147|gb|KY008498.1| 1914034 g4771 i0 99.351 97.4213836477987 154 1 97 0 5 158 476 629 Macrostomum qiaochengensis isolate FCY-2 18S ribosomal RNA gene, partial sequence blastn 15490 279 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum qiaochengensis
20556030 20556030 PRJNA1010662_P_NODE_15057_length_164_cov_2.686957_g14998_i0 PRJNA1010662 15057 164 2.686957 4.40660948 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 281 1.6000000000000001e-71   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g14998 i0 97.561 2.21341463414634 164 4 100 0 1 164 8535 8698 Stenostomum sthenum mitochondrion, complete genome blastn 363 281 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
20556118 20556118 PRJNA1010662_P_NODE_8177_length_199_cov_1.380000_g8118_i0 PRJNA1010662 8177 199 1.38 2.7462 root 1 Root_unresolved Root_unresolved 104 1.41e-25   NR VDL59718.1 6216 g8118 i0 75.4 10.7788944723618 65 16 98 0 195 1 170 234 VDL59718.1 unnamed protein product [Hymenolepis diminuta] diamond 2145 104 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta
21831749 21831749 PRJNA1010662_S_NODE_1678_length_241_cov_3.217172_g1633_i0 PRJNA1010662 1678 241 3.217172 7.75338452 Macrostomum sp. 36 JNB-2019 2614341 Platyhelminthes Platyhelminthes 444 3.06e-120   NTclustered gi|1837893144|gb|MT428645.1| 2614341 g1633 i0 100 100.016597510373 240 0 99 0 2 241 548 309 Macrostomum sp. 36 JNB-2019 voucher MTP_LS_3344 large subunit ribosomal RNA gene, partial sequence blastn 24104 444 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum sp. 36 JNB-2019
23107224 23107224 PRJNA1010662_P_NODE_5319_length_234_cov_1.583784_g5260_i0 PRJNA1010662 5319 234 1.583784 3.70605456 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 158 4.32e-34   NTclustered gi|924602|gb|U19945.1|SMU19945 6183 g5260 i0 81.592 11.7393162393162 201 27 84 9 38 233 1176 981 Schistosoma mansoni actin mRNA, complete cds blastn 2747 158 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
25227734 25227734 PRJNA1010662_S_NODE_4780_length_160_cov_0.854701_g4735_i0 PRJNA1010662 4780 160 0.854701 1.3675216 Macrostomum 39217 Platyhelminthes Platyhelminthes 296 5.55e-76   NTclustered gi|926460157|gb|KR132223.1| 282301 g4735 i0 100 96.28125 160 0 100 0 1 160 5021 5180 Macrostomum lignano clone c100550_g1_i1 mRNA sequence blastn 15405 296 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
26932139 26932139 PRJNA1010662_P_NODE_5802_length_226_cov_1.542373_g5743_i0 PRJNA1010662 5802 226 1.542373 3.48576298 Schistosomatidae 31245 Platyhelminthes Platyhelminthes 57.8 1.49e-7   NR CAH8532628.1 39320 g5743 i0 38.7 4.97787610619469 75 38 99.6 1 226 2 13 79 CAH8532628.1 unnamed protein product [Heterobilharzia americana] diamond 1125 57.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Heterobilharzia Heterobilharzia americana
27879903 27879903 PRJNA1010662_P_NODE_14285_length_166_cov_0.880342_g14226_i0 PRJNA1010662 14285 166 0.880342 1.46136772 Opisthokonta 33154 Platyhelminthes Platyhelminthes 77.4 7.24e-15   NR KAL3315165.1 1844966 g14226 i0 70.6 1.89759036144578 51 15 92.2 0 3 155 341 391 KAL3315165.1 hypothetical protein Ciccas_006212 [Cichlidogyrus casuarinus] diamond 315 77.8 0.994858611825193 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Dactylogyridea Ancyrocephalidae Cichlidogyrus Cichlidogyrus casuarinus
28732463 28732463 PRJNA1010662_P_NODE_10567_length_180_cov_1.969466_g10508_i0 PRJNA1010662 10567 180 1.969466 3.5450388 Paragonimus 34503 Platyhelminthes Platyhelminthes 51.6 1.18e-5   NR KAF8565673.1 34504 g10508 i0 53.7 1.36666666666667 41 18 66.7 1 15 134 302 342 KAF8565673.1 hypothetical protein P879_07354, partial [Paragonimus westermani] diamond 246 51.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus westermani
28921701 28921701 PRJNA1010662_P_NODE_1908_length_366_cov_5.962145_g1849_i0 PRJNA1010662 1908 366 5.962145 21.8214507 Cyclophyllidea 6201 Platyhelminthes Platyhelminthes 52.8 3.55e-5   NR CDS37392.1 6211 g1849 i0 41 1.87704918032787 78 34 60.7 4 283 62 206 275 CDS37392.1 calbindin 32 [Echinococcus multilocularis] diamond 687 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus multilocularis
29016924 29016924 PRJNA1010662_P_NODE_16128_length_163_cov_0.903509_g16069_i0 PRJNA1010662 16128 163 0.903509 1.47271967 Metazoa 33208 Platyhelminthes Platyhelminthes 69.3 5.35e-12   NR KAF8563514.1 34504 g16069 i0 48.1 244.490797546012 54 28 99.4 0 2 163 894 947 KAF8563514.1 hypothetical protein P879_07973 [Paragonimus westermani] diamond 39852 69.7 0.994261119081779 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus westermani
31171717 31171717 PRJNA1010662_P_NODE_8895_length_192_cov_1.895105_g8836_i0 PRJNA1010662 8895 192 1.895105 3.6386016 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 56.6 2.27e-8   NR PAA58301.1 282301 g8836 i0 38.1 1.8125 63 38 98.4 1 4 192 33 94 PAA58301.1 hypothetical protein BOX15_Mlig001673g1 [Macrostomum lignano] diamond 348 56.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
31575722 31575722 PRJNA1010662_P_NODE_1516_length_413_cov_1.700549_g1457_i0 PRJNA1010662 1516 413 1.700549 7.02326737 Opisthokonta 33154 Platyhelminthes Platyhelminthes 78.6 3.06e-15   NR VDD79404.1 53468 g1457 i0 58.3 3.11622276029056 60 25 43.6 0 181 2 4 63 VDD79404.1 unnamed protein product [Mesocestoides corti] diamond 1287 78.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Mesocestoididae Mesocestoides Mesocestoides corti
32595501 32595501 PRJNA1010662_P_NODE_15360_length_164_cov_0.904348_g15301_i0 PRJNA1010662 15360 164 0.904348 1.48313072 Paragonimus kellicotti 100269 Platyhelminthes Platyhelminthes 51.2 5.13e-6   NR KAF6771045.1 100269 g15301 i0 46.2 0.951219512195122 52 28 95.1 0 160 5 11 62 KAF6771045.1 hypothetical protein AHF37_10406 [Paragonimus kellicotti] diamond 156 51.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus kellicotti
32619353 32619353 PRJNA1010662_P_NODE_4100_length_260_cov_1.966825_g4041_i0 PRJNA1010662 4100 260 1.966825 5.113745 Hymenolepididae 6214 Platyhelminthes Platyhelminthes 51.6 2.72e-5   NR CDS31946.1 85433 g4041 i0 40.5 2.59615384615385 74 38 84.2 3 35 253 179 247 CDS31946.1 calbindin 32 [Hymenolepis microstoma] diamond 675 52 0.992307692307692 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
32682150 32682150 PRJNA1010662_P_NODE_4540_length_249_cov_2.180000_g4481_i0 PRJNA1010662 4540 249 2.18 5.4282 Metazoa 33208 Platyhelminthes Platyhelminthes 59.3 4.91e-8   NR VUZ55083.1 6216 g4481 i0 42.5 3.89156626506024 80 45 95.2 1 245 9 111 190 VUZ55083.1 unnamed protein product [Hymenolepis diminuta] diamond 969 59.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;