RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1010662", tax_kingdom = "Metazoa" and tax_phylum = "Onychophora"

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tax_superkingdom 1

tax_phylum 1

  • Onychophora · 1 ✖

tax_kingdom 1

  • Metazoa · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1010662 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
154862 154862 PRJNA1010662_P_NODE_10881_length_178_cov_1.945736_g10822_i0 PRJNA1010662 10881 178 1.945736 3.46341008 Peripatus sp. Per2 109759 Onychophora other_Eukaryota 132 1.88e-26   NTclustered gi|13111525|gb|AF240835.1| 109759 g10822 i0 86.066 0.910112359550562 122 17 69 0 6 127 1988 2109 Peripatus sp. 'Per2' elongation factor-2 mRNA, partial cds blastn 162 132 1 Eukaryota Opisthokonta Metazoa Onychophora Udeonychophora Euonychophora Peripatidae Peripatus Peripatus sp. Per2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;