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contig_metadata

14 rows where bioproject = "PRJNA1010662" and tax_kingdom = "Fusobacteriati"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 14 ✖

bioproject 1

  • PRJNA1010662 · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6104629 6104629 PRJNA1010662_S_NODE_1245_length_269_cov_6.867257_g1200_i0 PRJNA1010662 1245 269 6.867257 18.47292133 Cetobacterium 180162 Bacteria Bacteria 497 2.63e-136   NTclustered gi|2865368125|gb|CP122294.1| 188913 g1200 i0 100 523.513011152416 269 0 100 0 1 269 280799 280531 Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence blastn 140825 497 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
6533176 6533176 PRJNA1010662_S_NODE_4606_length_162_cov_2.008403_g4561_i0 PRJNA1010662 4606 162 2.008403 3.25361286 Leptotrichia sp. oral taxon 212 712357 Bacteria Bacteria 233 4.49e-57   NTclustered gi|922689899|gb|CP012410.1| 712357 g4561 i0 92.593 7.41358024691358 162 12 100 0 1 162 1472484 1472645 Leptotrichia sp. oral taxon 212 strain W10393, complete genome blastn 1201 233 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 212
7807522 7807522 PRJNA1010662_S_NODE_2667_length_203_cov_1.200000_g2622_i0 PRJNA1010662 2667 203 1.2 2.436 Fusobacterium pseudoperiodonticum 2663009 Bacteria Bacteria 375 9.24e-100   NTclustered gi|1276714546|gb|CP024702.1| 2663009 g2622 i0 100 12 203 0 100 0 1 203 2100836 2100634 Fusobacterium pseudoperiodonticum strain KCOM 1282 chromosome, complete genome blastn 2436 375 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium pseudoperiodonticum
7807528 7807528 PRJNA1010662_S_NODE_3147_length_190_cov_1.959184_g3102_i0 PRJNA1010662 3147 190 1.959184 3.7224496 Fusobacterium pseudoperiodonticum 2663009 Bacteria Bacteria 340 3.1099999999999993e-89   NTclustered gi|2705022034|gb|CP084128.1| 2663009 g3102 i0 98.947 100.1 190 2 100 0 1 190 1831743 1831932 Fusobacterium pseudoperiodonticum strain KCOM1322 chromosome, complete genome blastn 19019 340 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium pseudoperiodonticum
10358091 10358091 PRJNA1010662_S_NODE_1669_length_241_cov_9.489899_g1624_i0 PRJNA1010662 1669 241 9.489899 22.87065659 Cetobacterium somerae 188913 Bacteria Bacteria 442 1.0999999999999999e-119   NTclustered gi|2666488225|gb|CP143319.1| 188913 g1624 i0 100 447.381742738589 239 0 99 0 2 240 1318987 1318749 Cetobacterium somerae strain ceto chromosome, complete genome blastn 107819 442 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
10358118 10358118 PRJNA1010662_S_NODE_5469_length_151_cov_0.657407_g5424_i0 PRJNA1010662 5469 151 0.657407 0.99268457 Sneathia vaginalis 187101 Bacteria Bacteria 279 5.19e-71   NTclustered gi|808076794|gb|CP011280.1| 187101 g5424 i0 100 237.841059602649 151 0 100 0 1 151 160724 160574 Sneathia vaginalis strain SN35 chromosome, complete genome blastn 35914 279 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Sneathia Sneathia vaginalis
12908670 12908670 PRJNA1010662_S_NODE_2811_length_199_cov_1.070513_g2766_i0 PRJNA1010662 2811 199 1.070513 2.13032087 Leptotrichia sp. oral taxon 212 712357 Bacteria Bacteria 315 1.99e-81   NTclustered gi|922689899|gb|CP012410.1| 712357 g2766 i0 96.335 28.2311557788945 191 7 96 0 1 191 52080 51890 Leptotrichia sp. oral taxon 212 strain W10393, complete genome blastn 5618 315 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae Leptotrichia Leptotrichia sp. oral taxon 212
13754882 13754882 PRJNA1010662_S_NODE_3571_length_180_cov_2.065693_g3526_i0 PRJNA1010662 3571 180 2.065693 3.7182474 Fusobacterium 848 Bacteria Bacteria 333 4.87e-87   NTclustered gi|2078816781|gb|CP071094.1| 76857 g3526 i0 100 476.972222222222 180 0 100 0 1 180 963930 963751 Fusobacterium polymorphum strain THCT15E1 chromosome, complete genome blastn 85855 333 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium polymorphum
16303963 16303963 PRJNA1010662_S_NODE_1153_length_278_cov_2.042553_g1108_i0 PRJNA1010662 1153 278 2.042553 5.67829734 Fusobacterium 848 Bacteria Bacteria 514 2.7199999999999996e-141   NTclustered gi|2705003210|gb|CP084117.1| 851 g1108 i0 100 99.8309352517986 278 0 100 0 1 278 1957910 1958187 Fusobacterium nucleatum strain KCOM3486 chromosome, complete genome blastn 27753 514 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium nucleatum
18006728 18006728 PRJNA1010662_S_NODE_1555_length_248_cov_1.385366_g1510_i0 PRJNA1010662 1555 248 1.385366 3.43570768 Fusobacteria bacterium ZRK30 2970471 Bacteria Bacteria 287 5.649999999999999e-73   NTclustered gi|2284594148|gb|CP102404.1| 2970471 g1510 i0 97.059 117.528225806452 170 5 69 0 79 248 205544 205713 Fusobacteria bacterium ZRK30 chromosome 1, complete sequence blastn 29147 287 1 Bacteria   Fusobacteriati Fusobacteriota         Fusobacteria bacterium ZRK30
21403576 21403576 PRJNA1010662_S_NODE_4357_length_166_cov_1.170732_g4312_i0 PRJNA1010662 4357 166 1.170732 1.94341512 Fusobacterium 848 Bacteria Bacteria 307 2.69e-79   NTclustered gi|2704942200|gb|CP077195.1| 285729 g4312 i0 100 99.6024096385542 166 0 100 0 1 166 301367 301202 Fusobacterium canifelinum strain SB044 chromosome, complete genome blastn 16534 307 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium canifelinum
21403587 21403587 PRJNA1010662_S_NODE_5377_length_151_cov_3.703704_g5332_i0 PRJNA1010662 5377 151 3.703704 5.59259304 Fusobacteriaceae 203492 Bacteria Bacteria 274 2.42e-69   NTclustered gi|219878315|ref|NR_025454.1| 167643 g5332 i0 99.338 261.993377483444 151 1 100 0 1 151 1360 1510 Ilyobacter insuetus strain VenChi2 16S ribosomal RNA, partial sequence blastn 39561 274 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Ilyobacter Ilyobacter insuetus
25227705 25227705 PRJNA1010662_S_NODE_2340_length_214_cov_1.473684_g2295_i0 PRJNA1010662 2340 214 1.473684 3.15368376 Psychrilyobacter 623282 Bacteria Bacteria 385 1.64e-102   NTclustered gi|127315580|gb|EF426680.1| 271091 g2295 i0 99.065 410.644859813084 214 2 100 0 1 214 946 733 Psychrilyobacter atlanticus strain HAW-EB21 23S ribosomal RNA gene, partial sequence blastn 87878 385 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Psychrilyobacter Psychrilyobacter atlanticus
28202907 28202907 PRJNA1010662_P_NODE_15666_length_164_cov_0.878261_g15607_i0 PRJNA1010662 15666 164 0.878261 1.44034804 Fusobacteriaceae bacterium 2053555 Bacteria Bacteria 52.4 5.02e-6   NR BFO51970.1 2053555 g15607 i0 48.1 1.97560975609756 54 28 98.8 0 163 2 210 263 BFO51970.1 hypothetical protein F9N8_11830 [Fusobacteriaceae bacterium] diamond 324 52.4 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae   Fusobacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;