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contig_metadata

6 rows where bioproject = "PRJNA1010662", tax_clade = "Stenosarchaea group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 6 ✖

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 6 ✖

bioproject 1

  • PRJNA1010662 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5257800 5257800 PRJNA1010662_P_NODE_1905_length_367_cov_1.160377_g1846_i0 PRJNA1010662 1905 367 1.160377 4.25858359 Natrinema pallidum 69527 Archaea Archaea 52.8 0.035   NTclustered gi|1674552828|gb|CP040639.1| 69527 g1846 i0 100 0.152588555858311 28 0 8 0 240 267 4328 4301 Natrinema pallidum strain BOL6-1 plasmid pNPA70, complete sequence blastn 56 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema pallidum
5257850 5257850 PRJNA1010662_P_NODE_7685_length_203_cov_2.616883_g7626_i0 PRJNA1010662 7685 203 2.616883 5.31227249 Haloarcula litorea 3032579 Archaea Archaea 52.8 0.018   NTclustered gi|2463595526|gb|CP119779.1| 3032579 g7626 i0 100 0.137931034482759 28 0 14 0 165 192 2182480 2182507 Haloarcula litorea strain GDY20 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula litorea
9082399 9082399 PRJNA1010662_P_NODE_368_length_814_cov_2.708497_g326_i0 PRJNA1010662 368 814 2.708497 22.04716558 Methanosarcinales archaeon 2250255 Archaea Archaea 520 2.849999999999999e-183   NR RYE83110.1 2250255 g326 i0 93.7 0.998771498771499 271 17 99.9 0 2 814 80 350 RYE83110.1 MAG: translation elongation factor EF-1 subunit alpha, partial [Methanosarcinales archaeon] diamond 813 520 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
28424280 28424280 PRJNA1010662_P_NODE_14766_length_165_cov_0.896552_g14707_i0 PRJNA1010662 14766 165 0.896552 1.4793108 Methanorbis rubei 3028300 Archaea Archaea 60.8 5.38e-9   NR WP_338096598.1 3028300 g14707 i0 55.8 1.89090909090909 52 23 94.5 0 165 10 171 222 WP_338096598.1 ribosome biogenesis/translation initiation ATPase RLI [Methanorbis rubei] diamond 312 60.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanorbis Methanorbis rubei
28676879 28676879 PRJNA1010662_P_NODE_9267_length_190_cov_0.929078_g9208_i0 PRJNA1010662 9267 190 0.929078 1.7652482 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 48.5 1.34e-4   NR MCZ7391777.1 2032688 g9208 i0 39.3 0.884210526315789 56 33 88.4 1 2 169 33 87 MCZ7391777.1 SDR family oxidoreductase [Candidatus Methanoperedens sp.] diamond 168 48.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
31171701 31171701 PRJNA1010662_P_NODE_11975_length_171_cov_2.377049_g11916_i0 PRJNA1010662 11975 171 2.377049 4.06475379 Halogeometricum borinquense 60847 Archaea Archaea 42.4 0.0197   NR WP_174261571.1 60847 g11916 i0 44.4 0.789473684210526 45 25 78.9 0 1 135 202 246 WP_174261571.1 signal peptide peptidase SppA [Halogeometricum borinquense] diamond 135 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halogeometricum Halogeometricum borinquense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;