RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1010662", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1010662 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6533092 6533092 PRJNA1010662_P_NODE_3666_length_272_cov_2.125561_g3607_i0 PRJNA1010662 3666 272 2.125561 5.78152592 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 115 3.22e-28   NR ETO14283.1 46433 g3607 i0 57.3 1.97426470588235 89 38 98.2 0 2 268 122 210 ETO14283.1 hypothetical protein RFI_23087 [Reticulomyxa filosa] diamond 537 115 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27540152 27540152 PRJNA1010662_P_NODE_13704_length_167_cov_0.872881_g13645_i0 PRJNA1010662 13704 167 0.872881 1.45771127 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 49.7 4.68e-5   NR ETO11169.1 46433 g13645 i0 45.5 0.988023952095808 55 28 95.2 1 164 6 302 356 ETO11169.1 hypothetical protein RFI_26207 [Reticulomyxa filosa] diamond 165 49.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28669389 28669389 PRJNA1010662_P_NODE_6507_length_217_cov_0.910714_g6448_i0 PRJNA1010662 6507 217 0.910714 1.97624938 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 61.6 5.65e-9   NR ETO05964.1 46433 g6448 i0 58.8 3.34562211981567 51 20 70.5 1 9 161 174 223 ETO05964.1 Beta-lactamase [Reticulomyxa filosa] diamond 726 61.6 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30224032 30224032 PRJNA1010662_P_NODE_7672_length_204_cov_0.967742_g7613_i0 PRJNA1010662 7672 204 0.967742 1.97419368 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0102   NR ETO25337.1 46433 g7613 i0 33.3 0.838235294117647 57 38 83.8 0 183 13 71 127 ETO25337.1 hypothetical protein RFI_11798, partial [Reticulomyxa filosa] diamond 171 42.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31139973 31139973 PRJNA1010662_P_NODE_16835_length_162_cov_0.911504_g16776_i0 PRJNA1010662 16835 162 0.911504 1.47663648 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.00833   NR ETO03763.1 46433 g16776 i0 42.2 1.7037037037037 45 26 83.3 0 3 137 113 157 ETO03763.1 hypothetical protein RFI_33639, partial [Reticulomyxa filosa] diamond 276 43.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32626756 32626756 PRJNA1010662_P_NODE_15160_length_164_cov_1.660870_g15101_i0 PRJNA1010662 15160 164 1.66087 2.7238268 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 51.2 5.41e-6   NR ETO36728.1 46433 g15101 i0 43.2 0.804878048780488 44 25 80.5 0 163 32 83 126 ETO36728.1 hypothetical protein RFI_00333 [Reticulomyxa filosa] diamond 132 51.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;