RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1010662", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1010662 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30319448 30319448 PRJNA1010662_P_NODE_8592_length_195_cov_1.397260_g8533_i0 PRJNA1010662 8592 195 1.39726 2.724657 Minisyncoccota bacterium 2053589 Bacteria Bacteria 57.8 9.62e-8   NR MBC7406177.1 2053589 g8533 i0 38.7 0.953846153846154 62 38 95.4 0 8 193 248 309 MBC7406177.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 186 57.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30666376 30666376 PRJNA1010662_P_NODE_12173_length_170_cov_1.702479_g12114_i0 PRJNA1010662 12173 170 1.702479 2.8942143 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.5 0.00738   NR MDR3548435.1 2053589 g12114 i0 48.5 0.582352941176471 33 17 58.2 0 4 102 135 167 MDR3548435.1 HAD-IC family P-type ATPase [Candidatus Paceibacterota bacterium] diamond 99 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32121086 32121086 PRJNA1010662_P_NODE_6158_length_221_cov_1.494186_g6099_i0 PRJNA1010662 6158 221 1.494186 3.30215106 Minisyncoccota bacterium 2053589 Bacteria Bacteria 112 3.9300000000000005e-27   NR MEX0597309.1 2053589 g6099 i0 63 0.990950226244344 73 27 99.1 0 2 220 384 456 MEX0597309.1 deoxyribodipyrimidine photo-lyase [Candidatus Paceibacterota bacterium] diamond 219 112 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;