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contig_metadata

30 rows where bioproject = "PRJNA1010662", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 30 ✖

tax_clade 1

  • Amoebozoa · 30 ✖

bioproject 1

  • PRJNA1010662 · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1429702 1429702 PRJNA1010662_P_NODE_4702_length_245_cov_9.285714_g4643_i0 PRJNA1010662 4702 245 9.285714 22.7499993 Cochliopodium minus 313997 Discosea other_Eukaryota 333 7.049999999999999e-87   NTclustered gi|330902862|gb|JF298257.1| 313997 g4643 i0 94.495 10.065306122449 218 8 89 4 3 219 218 4 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 2466 333 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
3552014 3552014 PRJNA1010662_P_NODE_2003_length_358_cov_2.288026_g1944_i0 PRJNA1010662 2003 358 2.288026 8.19113308 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 182 8.1e-51   NR XP_004337289.1 1257118 g1944 i0 69.5 1.96927374301676 118 36 98.9 0 356 3 549 666 XP_004337289.1 eukaryotic translation elongation factor 2, putative [Acanthamoeba castellanii str. Neff] diamond 705 182 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9082370 9082370 PRJNA1010662_P_NODE_17068_length_159_cov_6.136364_g17009_i0 PRJNA1010662 17068 159 6.136364 9.75681876 Cochliopodium minus 313997 Discosea other_Eukaryota 294 1.98e-75   NTclustered gi|330902862|gb|JF298257.1| 313997 g17009 i0 100 17.0377358490566 159 0 100 0 1 159 259 417 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 2709 294 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
20556058 20556058 PRJNA1010662_P_NODE_2337_length_333_cov_1.961268_g2278_i0 PRJNA1010662 2337 333 1.961268 6.53102244 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 131 3.86e-36   NR XP_004334896.1 1257118 g2278 i0 55 0.981981981981982 109 49 98.2 0 7 333 53 161 XP_004334896.1 ribosomal protein L6, putative [Acanthamoeba castellanii str. Neff] diamond 327 131 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23107144 23107144 PRJNA1010662_P_NODE_10879_length_178_cov_1.976744_g10820_i0 PRJNA1010662 10879 178 1.976744 3.51860432 Cochliopodium minus 313997 Discosea other_Eukaryota 239 1.08e-58   NTclustered gi|1914009695|gb|MT975597.1| 313997 g10820 i0 90.96 99.2303370786517 177 16 99 0 2 178 511 687 Cochliopodium minus clone 2 actin gene, partial cds blastn 17663 239 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
26749211 26749211 PRJNA1010662_P_NODE_2801_length_308_cov_1.667954_g2742_i0 PRJNA1010662 2801 308 1.667954 5.13729832 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 109 3.1200000000000003e-27   NR XP_004349741.1 1257118 g2742 i0 53 1.94805194805195 100 47 97.4 0 305 6 46 145 XP_004349741.1 uncharacterized protein ACA1_034610 [Acanthamoeba castellanii str. Neff] diamond 600 109 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27223988 27223988 PRJNA1010662_P_NODE_11103_length_177_cov_1.320312_g11044_i0 PRJNA1010662 11103 177 1.320312 2.33695224 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 48.9 1.76e-5   NR XP_004334110.1 1257118 g11044 i0 38.9 1.88135593220339 54 33 91.5 0 12 173 40 93 XP_004334110.1 Actininteracting protein, putative [Acanthamoeba castellanii str. Neff] diamond 333 48.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27287374 27287374 PRJNA1010662_P_NODE_14003_length_166_cov_0.888889_g13944_i0 PRJNA1010662 14003 166 0.888889 1.47555574 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 77.8 5.73e-15   NR XP_004334901.1 1257118 g13944 i0 76 0.903614457831325 50 12 90.4 0 2 151 221 270 XP_004334901.1 plastin 3 (T isoform), putative [Acanthamoeba castellanii str. Neff] diamond 150 77.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27445659 27445659 PRJNA1010662_P_NODE_7383_length_207_cov_1.278481_g7324_i0 PRJNA1010662 7383 207 1.278481 2.64645567 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 72.4 5.97e-13   NR XP_004367886.1 1257118 g7324 i0 50.7 1.02898550724638 71 32 98.6 1 206 3 179 249 XP_004367886.1 uncharacterized protein ACA1_288520 [Acanthamoeba castellanii str. Neff] diamond 213 72.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27508679 27508679 PRJNA1010662_P_NODE_15463_length_164_cov_0.895652_g15404_i0 PRJNA1010662 15463 164 0.895652 1.46886928 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 86.7 3.95e-18   NR XP_004338820.1 1257118 g15404 i0 70.6 0.932926829268293 51 15 93.3 0 155 3 73 123 XP_004338820.1 lysosomal ProX carboxypeptidase [Acanthamoeba castellanii str. Neff] diamond 153 86.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27855759 27855759 PRJNA1010662_P_NODE_10325_length_182_cov_1.541353_g10266_i0 PRJNA1010662 10325 182 1.541353 2.80526246 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 42.7 0.0168   NR XP_004367536.1 1257118 g10266 i0 43.6 0.906593406593407 55 24 85.7 2 25 180 345 395 XP_004367536.1 chloride transporter, chloride channel (ClC) subfamily protein [Acanthamoeba castellanii str. Neff] diamond 165 42.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27855773 27855773 PRJNA1010662_P_NODE_14905_length_165_cov_0.887931_g14846_i0 PRJNA1010662 14905 165 0.887931 1.46508615 Thecamoeba sp. ATCC PRA-35 439946 Discosea other_Eukaryota 106 1.35e-25   NR ABX25968.1 439946 g14846 i0 92.7 1 55 4 100 0 1 165 130 184 ABX25968.1 beta-tubulin, partial [Thecamoeba sp. ATCC PRA-35] diamond 165 106 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba sp. ATCC PRA-35
28487416 28487416 PRJNA1010662_P_NODE_5467_length_232_cov_0.923497_g5408_i0 PRJNA1010662 5467 232 0.923497 2.14251304 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 92.4 1.02e-19   NR XP_004340668.1 1257118 g5408 i0 64 0.969827586206897 75 27 97 0 6 230 503 577 XP_004340668.1 inorganic anion transporter, sulfate permease (SulP) subfamily protein [Acanthamoeba castellanii str. Neff] diamond 225 92.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28676857 28676857 PRJNA1010662_P_NODE_13767_length_167_cov_0.864407_g13708_i0 PRJNA1010662 13767 167 0.864407 1.44355969 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 43.9 0.00528   NR XP_004352470.1 1257118 g13708 i0 41.8 0.988023952095808 55 31 97 1 162 1 619 673 XP_004352470.1 uncharacterized protein ACA1_360080 [Acanthamoeba castellanii str. Neff] diamond 165 43.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29111424 29111424 PRJNA1010662_P_NODE_14068_length_166_cov_0.888889_g14009_i0 PRJNA1010662 14068 166 0.888889 1.47555574 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 84.7 2.12e-17   NR XP_004340684.1 1257118 g14009 i0 72.2 1.95180722891566 54 15 97.6 0 166 5 484 537 XP_004340684.1 Protein transport protein sec23, putative [Acanthamoeba castellanii str. Neff] diamond 324 84.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29300771 29300771 PRJNA1010662_P_NODE_12609_length_169_cov_0.866667_g12550_i0 PRJNA1010662 12609 169 0.866667 1.46466723 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 49.7 4.5e-5   NR XP_004355031.1 1257118 g12550 i0 42.6 1.79289940828402 47 25 83.4 1 26 166 159 203 XP_004355031.1 LIM domain containing protein [Acanthamoeba castellanii str. Neff] diamond 303 49.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29844964 29844964 PRJNA1010662_P_NODE_17251_length_156_cov_2.214953_g17192_i0 PRJNA1010662 17251 156 2.214953 3.45532668 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 59.3 1.65e-8   NR XP_004336447.1 1257118 g17192 i0 60 0.865384615384615 45 18 86.5 0 1 135 309 353 XP_004336447.1 NADH dehydrogenase, putative [Acanthamoeba castellanii str. Neff] diamond 135 59.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30224016 30224016 PRJNA1010662_P_NODE_15952_length_163_cov_0.912281_g15893_i0 PRJNA1010662 15952 163 0.912281 1.48701803 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 79.7 1.17e-15   NR XP_004335836.1 1257118 g15893 i0 62.5 1.03067484662577 56 19 99.4 1 162 1 34 89 XP_004335836.1 uncharacterized protein ACA1_076760 [Acanthamoeba castellanii str. Neff] diamond 168 79.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30351016 30351016 PRJNA1010662_P_NODE_3952_length_264_cov_1.548837_g3893_i0 PRJNA1010662 3952 264 1.548837 4.08892968 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 73.9 2.47e-13   NR XP_004340095.1 1257118 g3893 i0 42.9 0.875 77 44 87.5 0 235 5 152 228 XP_004340095.1 eukaryotic initiation factor, putative [Acanthamoeba castellanii str. Neff] diamond 231 73.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30666381 30666381 PRJNA1010662_P_NODE_15793_length_163_cov_1.771930_g15734_i0 PRJNA1010662 15793 163 1.77193 2.8882459 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 52 1.75e-6   NR XP_004333787.1 1257118 g15734 i0 46.5 2.42944785276074 43 23 79.1 0 149 21 24 66 XP_004333787.1 Cofilin/tropomyosin-type actin-binding protein [Acanthamoeba castellanii str. Neff] diamond 396 52 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30824391 30824391 PRJNA1010662_P_NODE_8694_length_194_cov_1.420690_g8635_i0 PRJNA1010662 8694 194 1.42069 2.7561386 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 75.5 4.55e-14   NR XP_004358308.1 1257118 g8635 i0 64.5 0.958762886597938 62 22 95.9 0 188 3 36 97 XP_004358308.1 papain family cysteine protease subfamily protein [Acanthamoeba castellanii str. Neff] diamond 186 75.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31038379 31038379 PRJNA1010662_P_NODE_1135_length_478_cov_1.657343_g1076_i0 PRJNA1010662 1135 478 1.657343 7.92209954 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 158 5.52e-46   NR XP_004358287.1 1257118 g1076 i0 54.1 1.99581589958159 157 72 98.5 0 474 4 3 159 XP_004358287.1 eukaryotic ribosomal protein L18, putative [Acanthamoeba castellanii str. Neff] diamond 954 158 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31235045 31235045 PRJNA1010662_P_NODE_10655_length_180_cov_1.183206_g10596_i0 PRJNA1010662 10655 180 1.183206 2.1297708 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 77 1.29e-14   NR XP_004334795.1 1257118 g10596 i0 55.9 0.983333333333333 59 26 98.3 0 178 2 502 560 XP_004334795.1 uncharacterized protein ACA1_093180 [Acanthamoeba castellanii str. Neff] diamond 177 77 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31330022 31330022 PRJNA1010662_P_NODE_11276_length_176_cov_1.220472_g11217_i0 PRJNA1010662 11276 176 1.220472 2.14803072 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 68.2 1.62e-11   NR XP_004335605.1 1257118 g11217 i0 58.2 8.02840909090909 55 23 93.8 0 176 12 659 713 XP_004335605.1 WD domain, G-beta repeat-containing protein [Acanthamoeba castellanii str. Neff] diamond 1413 68.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31330042 31330042 PRJNA1010662_P_NODE_6036_length_223_cov_1.109195_g5977_i0 PRJNA1010662 6036 223 1.109195 2.47350485 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 72.4 9.73e-13   NR XP_004347769.1 1257118 g5977 i0 49.2 0.874439461883408 65 33 87.4 0 3 197 16 80 XP_004347769.1 transporter, major facilitator subfamily protein [Acanthamoeba castellanii str. Neff] diamond 195 72.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31456731 31456731 PRJNA1010662_P_NODE_6136_length_221_cov_1.813953_g6077_i0 PRJNA1010662 6136 221 1.813953 4.00883613 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 97.8 6.72e-22   NR XP_004342296.1 1257118 g6077 i0 61.1 0.97737556561086 72 28 97.7 0 220 5 358 429 XP_004342296.1 carboxypeptidase Ylike protein [Acanthamoeba castellanii str. Neff] diamond 216 97.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32121065 32121065 PRJNA1010662_P_NODE_13898_length_166_cov_1.760684_g13839_i0 PRJNA1010662 13898 166 1.760684 2.92273544 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 95.1 2.54e-21   NR XP_004336605.1 1257118 g13839 i0 78.2 28.8253012048193 55 12 99.4 0 165 1 207 261 XP_004336605.1 atpdependent rna helicase ddx6, putative [Acanthamoeba castellanii str. Neff] diamond 4785 95.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32247817 32247817 PRJNA1010662_P_NODE_16558_length_162_cov_0.920354_g16499_i0 PRJNA1010662 16558 162 0.920354 1.49097348 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 41.2 0.0439   NR XP_004332859.1 1257118 g16499 i0 40.4 0.962962962962963 52 30 94.4 1 154 2 762 813 XP_004332859.1 FAT domain containing protein [Acanthamoeba castellanii str. Neff] diamond 156 41.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32500840 32500840 PRJNA1010662_P_NODE_9079_length_191_cov_1.415493_g9020_i0 PRJNA1010662 9079 191 1.415493 2.70359163 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 70.5 2.59e-13   NR ABD46547.1 5755 g9020 i0 66.7 3.12565445026178 45 15 70.7 0 137 3 1 45 ABD46547.1 PfpI family peptidase, partial [Acanthamoeba castellanii] diamond 597 70.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32815731 32815731 PRJNA1010662_P_NODE_12260_length_170_cov_1.272727_g12201_i0 PRJNA1010662 12260 170 1.272727 2.1636359 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.9 4.29e-16   NR XP_004341596.1 1257118 g12201 i0 74 0.882352941176471 50 13 88.2 0 1 150 205 254 XP_004341596.1 uncharacterized protein ACA1_269310 [Acanthamoeba castellanii str. Neff] diamond 150 80.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;