contig_metadata
10 rows where bioproject = "PRJNA1009807" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154795 | 154795 | PRJNA1009807_S_NODE_1141_length_285_cov_3.467480_g1113_i0 | PRJNA1009807 | 1141 | 285 | 3.46748 | 9.882318 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 383 | 8.22e-102 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g1113 | i0 | 90.941 | 179.733333333333 | 287 | 23 | 99 | 3 | 2 | 285 | 1315815 | 1315529 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 51224 | 383 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 154814 | 154814 | PRJNA1009807_S_NODE_21_length_1232_cov_20.537301_g7_i1 | PRJNA1009807 | 21 | 1232 | 20.537301 | 253.01954832 | Rubellicoccus peritrichatus | 3080537 | Bacteria | Bacteria | 994 | 0 | NTclustered | gi|2605121622|gb|CP136920.1| | 3080537 | g7 | i1 | 82.288 | 228.801948051948 | 1180 | 179 | 94 | 27 | 59 | 1221 | 2162478 | 2161312 | Rubellicoccus peritrichatus strain CR14 isolate coral tank chromosome, complete genome | blastn | 281884 | 994 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Cerasicoccaceae | Rubellicoccus | Rubellicoccus peritrichatus | |
| 6532996 | 6532996 | PRJNA1009807_S_NODE_3146_length_182_cov_1.342657_g3118_i0 | PRJNA1009807 | 3146 | 182 | 1.342657 | 2.44363574 | Akkermansia glycaniphila | 1679444 | Bacteria | Bacteria | 97.1 | 7.05e-16 | NTclustered | gi|1093279401|emb|LT629973.1| | 1679444 | g3118 | i0 | 81.897 | 27.4285714285714 | 116 | 19 | 63 | 2 | 66 | 180 | 2888785 | 2888899 | Akkermansia glycaniphila isolate APytT genome assembly, chromosome: I | blastn | 4992 | 97.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia glycaniphila | |
| 9929410 | 9929410 | PRJNA1009807_S_NODE_3768_length_169_cov_1.700000_g3740_i0 | PRJNA1009807 | 3768 | 169 | 1.7 | 2.873 | Opitutaceae | 134623 | Bacteria | Bacteria | 285 | 1.28e-72 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g3740 | i0 | 97.041 | 25.585798816568 | 169 | 5 | 100 | 0 | 1 | 169 | 3073 | 3241 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 4324 | 285 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 9929419 | 9929419 | PRJNA1009807_S_NODE_768_length_337_cov_14.412752_g740_i0 | PRJNA1009807 | 768 | 337 | 14.412752 | 48.57097424 | Akkermansia | 239934 | Bacteria | Bacteria | 545 | 1.1999999999999999e-150 | NTclustered | gi|2756360508|gb|CP156688.1| | 239935 | g740 | i0 | 95.846 | 294.477744807122 | 337 | 14 | 100 | 0 | 1 | 337 | 360541 | 360205 | Akkermansia muciniphila strain AKK-TMU chromosome, complete genome | blastn | 99239 | 545 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 11204690 | 11204690 | PRJNA1009807_S_NODE_269_length_507_cov_16.989316_g243_i0 | PRJNA1009807 | 269 | 507 | 16.989316 | 86.13583212 | Akkermansia | 239934 | Bacteria | Bacteria | 621 | 3.0099999999999995e-173 | NTclustered | gi|2566450153|gb|CP114596.1| | 239935 | g243 | i0 | 88.845 | 300.173570019724 | 511 | 49 | 100 | 8 | 1 | 507 | 321588 | 322094 | Akkermansia muciniphila strain MmAkk2 chromosome, complete genome | blastn | 152188 | 621 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 18006555 | 18006555 | PRJNA1009807_S_NODE_3035_length_184_cov_2.317241_g3007_i0 | PRJNA1009807 | 3035 | 184 | 2.317241 | 4.26372344 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 91.6 | 3.33e-14 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g3007 | i0 | 87.5 | 52.625 | 80 | 8 | 43 | 2 | 1 | 80 | 3803573 | 3803650 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 9683 | 91.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 18853080 | 18853080 | PRJNA1009807_S_NODE_135_length_638_cov_20.824708_g116_i0 | PRJNA1009807 | 135 | 638 | 20.824708 | 132.86163704 | Akkermansia | 239934 | Bacteria | Bacteria | 632 | 1.7799999999999996e-176 | NTclustered | gi|2756360508|gb|CP156688.1| | 239935 | g116 | i0 | 84.664 | 297.492163009404 | 639 | 93 | 99 | 4 | 1 | 637 | 362730 | 362095 | Akkermansia muciniphila strain AKK-TMU chromosome, complete genome | blastn | 189800 | 638 | 0.990595611285266 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 18853093 | 18853093 | PRJNA1009807_S_NODE_235_length_532_cov_9.411765_g211_i0 | PRJNA1009807 | 235 | 532 | 9.411765 | 50.0705898 | Verrucomicrobiales | 48461 | Bacteria | Bacteria | 558 | 2.52e-154 | NTclustered | gi|1093279401|emb|LT629973.1| | 1679444 | g211 | i0 | 86.863 | 283.332706766917 | 510 | 54 | 95 | 12 | 30 | 532 | 909910 | 910413 | Akkermansia glycaniphila isolate APytT genome assembly, chromosome: I | blastn | 150733 | 560 | 0.996428571428571 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia glycaniphila | |
| 21831602 | 21831602 | PRJNA1009807_S_NODE_4578_length_156_cov_2.452991_g4550_i0 | PRJNA1009807 | 4578 | 156 | 2.452991 | 3.82666596 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 267 | 4.2199999999999997e-67 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g4550 | i0 | 97.436 | 16.9935897435897 | 156 | 4 | 100 | 0 | 1 | 156 | 1315869 | 1316024 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 2651 | 267 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;