RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1009807" and tax_phylum = "Deinococcota"

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tax_superkingdom 1

tax_phylum 1

  • Deinococcota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1009807 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21403475 21403475 PRJNA1009807_S_NODE_2097_length_215_cov_1.801136_g2069_i0 PRJNA1009807 2097 215 1.801136 3.8724424 Bacteria 2 Bacteria Bacteria 104 3.9e-24   NR 1TAQ_A 271 g2069 i0 100 3.69767441860465 53 0 74 0 2 160 779 831 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] diamond 795 104 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
29584592 29584592 PRJNA1009807_S_NODE_1670_length_237_cov_1.449495_g1642_i0 PRJNA1009807 1670 237 1.449495 3.43530315 root 1 Root_unresolved Root_unresolved 159 4.18e-43   NR 1TAQ_A 271 g1642 i0 100 4 79 0 100 0 237 1 481 559 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] diamond 948 159 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
30343517 30343517 PRJNA1009807_S_NODE_2372_length_204_cov_2.193939_g2344_i0 PRJNA1009807 2372 204 2.193939 4.47563556 Bacteria 2 Bacteria Bacteria 135 5.27e-35   NR 1TAQ_A 271 g2344 i0 100 5 68 0 100 0 1 204 78 145 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] diamond 1020 135 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
30469643 30469643 PRJNA1009807_S_NODE_1893_length_225_cov_1.741935_g1865_i0 PRJNA1009807 1893 225 1.741935 3.91935375 Bacteria 2 Bacteria Bacteria 165 1.63e-45   NR 1TAQ_A 271 g1865 i0 100 4 75 0 100 0 225 1 143 217 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] diamond 900 165 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;