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contig_metadata

15 rows where bioproject = "PRJNA1009807" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA1009807 · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3551991 3551991 PRJNA1009807_S_NODE_663_length_359_cov_44.078125_g635_i0 PRJNA1009807 663 359 44.078125 158.24046875 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 647 0   NTclustered gi|13194559|gb|AF300281.1|AF300281 151077 g635 i0 99.438 99.1810584958217 356 2 99 0 4 359 1537 1182 Chilodonella uncinata clone 1 18S small subunit ribosomal RNA gene, partial sequence blastn 35606 647 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
5257749 5257749 PRJNA1009807_S_NODE_825_length_326_cov_109.466899_g797_i0 PRJNA1009807 825 326 109.466899 356.86209074 uncultured ciliate 187299 SAR_Eukaryotes SAR_Eukaryotes 538 1.9299999999999992e-148   NTclustered gi|221185865|gb|FJ577812.1| 187299 g797 i0 96.615 85.6134969325153 325 10 99 1 1 325 498 821 Uncultured ciliate clone Ivry08 18S ribosomal RNA gene, partial sequence blastn 27910 538 1 Eukaryota Sar   Ciliophora         uncultured ciliate
7378970 7378970 PRJNA1009807_S_NODE_3386_length_176_cov_9.065693_g3358_i0 PRJNA1009807 3386 176 9.065693 15.95561968 Uronychia 5955 SAR_Eukaryotes SAR_Eukaryotes 217 4.98e-52   NTclustered gi|342161097|gb|JF694062.1| 438879 g3358 i0 89.535 98.3068181818182 172 16 98 2 2 173 915 746 Uronychia setigera voucher JJM2010032103 28S ribosomal RNA gene, partial sequence blastn 17302 217 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Uronychiidae Uronychia Uronychia setigera
7807389 7807389 PRJNA1009807_S_NODE_67_length_879_cov_56.473810_g52_i0 PRJNA1009807 67 879 56.47381 496.4047899 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 1040 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g52 i0 94.643 44.3686006825939 672 34 76 2 208 878 1 671 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 39000 1040 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
8654533 8654533 PRJNA1009807_S_NODE_2387_length_203_cov_53.762195_g2359_i0 PRJNA1009807 2387 203 53.762195 109.13725585 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 372 1.2e-98   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2359 i0 100 100.413793103448 201 0 99 0 3 203 946 1146 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 20384 372 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
11204709 11204709 PRJNA1009807_S_NODE_409_length_442_cov_106.121588_g381_i0 PRJNA1009807 409 442 106.121588 469.05741896 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 791 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g381 i0 99.539 84.89592760181 434 2 98 0 9 442 1928 1495 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 37524 791 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
11204710 11204710 PRJNA1009807_S_NODE_4149_length_162_cov_123.634146_g4121_i0 PRJNA1009807 4149 162 123.634146 200.28731652 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 300 4.36e-77   NTclustered gi|347439265|gb|JN111978.1| 151077 g4121 i0 100 101.543209876543 162 0 100 0 1 162 1040 879 Chilodonella uncinata strain USA_WH small subunit ribosomal RNA gene, partial sequence; macronuclear blastn 16450 300 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
11633393 11633393 PRJNA1009807_S_NODE_1210_length_275_cov_23.720339_g1182_i0 PRJNA1009807 1210 275 23.720339 65.23093225 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 496 9.709999999999999e-136   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g1182 i0 99.27 100.330909090909 274 2 99 0 2 275 921 648 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 27591 496 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
11633426 11633426 PRJNA1009807_S_NODE_450_length_424_cov_50.179221_g422_i0 PRJNA1009807 450 424 50.179221 212.75989704 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 695 0   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g422 i0 96.226 71.5919811320755 424 16 100 0 1 424 2330 1907 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 30355 695 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
12480210 12480210 PRJNA1009807_S_NODE_2330_length_205_cov_90.463855_g2302_i0 PRJNA1009807 2330 205 90.463855 185.45090275 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 340 3.41e-89   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2302 i0 97.487 102.263414634146 199 5 97 0 1 199 2375 2573 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 20964 340 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
16303905 16303905 PRJNA1009807_S_NODE_2533_length_198_cov_89.830189_g2505_i0 PRJNA1009807 2533 198 89.830189 177.86377422 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 355 1.17e-93   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2505 i0 98.99 100.545454545455 198 2 100 0 1 198 1465 1268 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 19908 355 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
17579242 17579242 PRJNA1009807_S_NODE_2154_length_212_cov_20.075145_g2126_i0 PRJNA1009807 2154 212 20.075145 42.5593074 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 379 7.529999999999998e-101   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2126 i0 100 96.9150943396226 205 0 97 0 8 212 2770 2566 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 20546 379 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
17579290 17579290 PRJNA1009807_S_NODE_754_length_340_cov_60.245847_g726_i0 PRJNA1009807 754 340 60.245847 204.8358798 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 189 2.3499999999999992e-43   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g726 i0 97.297 1.76764705882353 111 3 33 0 1 111 2972 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 601 189 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
25227607 25227607 PRJNA1009807_S_NODE_1000_length_301_cov_80.530534_g972_i0 PRJNA1009807 1000 301 80.530534 242.39690734 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 542 1.36e-149   NTclustered gi|1389430796|gb|MH341624.1| 1654720 g972 i0 99.331 98.78073089701 299 2 99 0 3 301 354 56 Chilodonella piscicola strain C.piscicola SC small subunit ribosomal RNA gene, partial sequence blastn 29733 542 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
31132567 31132567 PRJNA1009807_S_NODE_4535_length_157_cov_1.042373_g4507_i0 PRJNA1009807 4535 157 1.042373 1.63652561 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 78.2 1.21e-16   NR CAI2383002.1 5936 g4507 i0 66 3.82165605095541 50 17 95.5 0 152 3 72 121 CAI2383002.1 unnamed protein product [Moneuplotes crassus] diamond 600 78.2 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;