RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1009807", tax_kingdom = "Orthornavirae" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA1009807 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
154808 154808 PRJNA1009807_S_NODE_1_length_4543_cov_24.287078_g0_i0 PRJNA1009807 1 4543 24.287078 1103.36195354 Totivirus ichi 3432942 Viruses Viruses 8274 0   NTclustered gi|558066|gb|J04692.1|SCSCOATRNA 11008 g0 i0 99.538 23.9170151882016 4543 21 100 0 1 4543 4564 22 Saccharomyces cerevisiae virus L-A major coat protein, ssRNA-binding protein, and RNA polymerase genes, complete cds blastn 108655 8274 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ichi
3981258 3981258 PRJNA1009807_S_NODE_4_length_2296_cov_13.323881_g3_i0 PRJNA1009807 4 2296 13.323881 305.91630776 Totivirus ni 3432954 Viruses Viruses 4091 0   NTclustered gi|9627980|ref|NC_001641.1| 42478 g3 i0 98.867 4.3366724738676 2294 24 99 2 2 2294 4614 2322 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 9957 4091 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni
6533013 6533013 PRJNA1009807_S_NODE_6_length_2205_cov_12.338873_g5_i0 PRJNA1009807 6 2205 12.338873 272.07214965 Totivirus ni 3432954 Viruses Viruses 4024 0   NTclustered gi|9627980|ref|NC_001641.1| 42478 g5 i0 99.682 3.61179138321995 2200 7 99 0 6 2205 2329 130 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 7964 4024 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;