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contig_metadata

17 rows where bioproject = "PRJNA1009807" and tax_kingdom = "Metazoa"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Metazoa · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA1009807 · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
154811 154811 PRJNA1009807_S_NODE_2081_length_216_cov_1.593220_g2053_i0 PRJNA1009807 2081 216 1.59322 3.4413552 Timema genevievae 629358 Arthropoda Arthropoda 52.8 0.019   NTclustered gi|1964503389|emb|OE840646.1| 629358 g2053 i0 100 0.12962962962963 28 0 13 0 79 106 115144 115171 5_Tge_b3v08 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Phasmatodea Timematidae Timema Timema genevievae
3981241 3981241 PRJNA1009807_S_NODE_3484_length_174_cov_3.600000_g3456_i0 PRJNA1009807 3484 174 3.6 6.264 Polypterus senegalus 55291 Chordata Chordata 195 2.3e-45   NTclustered gi|1993937637|ref|XM_039741126.1| 55291 g3456 i0 90.132 9.79885057471264 152 12 86 3 1 150 1323 1173 PREDICTED: Polypterus senegalus E3 SUMO-protein ligase ZBED1-like (LOC120518358), transcript variant X2, mRNA blastn 1705 195 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
5257712 5257712 PRJNA1009807_S_NODE_2205_length_210_cov_26.637427_g2177_i0 PRJNA1009807 2205 210 26.637427 55.9385967 Myolaimus byersi 1811516 Nematoda Nematoda 209 1.03e-49   NTclustered gi|1003466868|gb|KU180676.1| 1811516 g2177 i0 85.507 99.5333333333333 207 23 98 7 6 210 1047 1248 Myolaimus byersi 28S ribosomal RNA gene, partial sequence blastn 20902 209 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Myolaimidae Myolaimus Myolaimus byersi
5257751 5257751 PRJNA1009807_S_NODE_905_length_314_cov_5.334545_g877_i0 PRJNA1009807 905 314 5.334545 16.7504713 Speleorchestes sp. AD1084 2051767 Arthropoda Arthropoda 104 8e-18   NTclustered gi|1282187773|gb|KY921978.1| 2051767 g877 i0 83.478 5.14012738853503 115 16 36 3 128 239 2454 2568 Speleorchestes sp. AD1084 voucher UMMZ BMOC 07-0615-007 AD1084 28S ribosomal RNA gene, partial sequence blastn 1614 104 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Sarcoptiformes Nanorchestidae Speleorchestes Speleorchestes sp. AD1084
6532973 6532973 PRJNA1009807_S_NODE_1406_length_255_cov_2.833333_g1378_i0 PRJNA1009807 1406 255 2.833333 7.22499915 Harbansus paucichelatus 178850 Arthropoda Arthropoda 99 2.93e-16   NTclustered gi|751143631|gb|KM875573.1| 178850 g1378 i0 75.214 10.9333333333333 234 45 89 12 2 227 343 571 Harbansus paucichelatus isolate M1 28S ribosomal RNA gene, partial sequence blastn 2788 99 1 Eukaryota Opisthokonta Metazoa Arthropoda Ostracoda Myodocopida Philomedidae Harbansus Harbansus paucichelatus
10357921 10357921 PRJNA1009807_S_NODE_2469_length_200_cov_11.086957_g2441_i0 PRJNA1009807 2469 200 11.086957 22.173914 Galathea rostrata 1377960 Arthropoda Arthropoda 60.2 1.04e-4   NTclustered gi|527498840|gb|KF182504.1| 1377960 g2441 i0 92.857 3.29 42 2 21 1 139 180 854 814 Galathea rostrata voucher KC4767/ULLZ7681 18S ribosomal RNA gene, partial sequence blastn 658 60.2 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Decapoda Galatheidae Galathea Galathea rostrata
12480208 12480208 PRJNA1009807_S_NODE_2270_length_208_cov_3.248521_g2242_i0 PRJNA1009807 2270 208 3.248521 6.75692368 Metazoa 33208 Mollusca Mollusca 54.7 0.005   NTclustered gi|1517521407|gb|MK190976.1| 13016 g2242 i0 96.875 0.293269230769231 32 1 15 0 173 204 1229 1260 Codakia orbicularis voucher SDSM:134093 large subunit ribosomal RNA gene, partial sequence blastn 61 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Lucinida Lucinidae Codakia Codakia orbicularis
14183465 14183465 PRJNA1009807_S_NODE_3272_length_179_cov_1.442857_g3244_i0 PRJNA1009807 3272 179 1.442857 2.58271403 Timema cristinae 61476 Arthropoda Arthropoda 58.4 3.26e-4   NTclustered gi|1946878153|emb|OC316793.1| 61476 g3244 i0 97.059 0.189944134078212 34 1 19 0 91 124 333653 333620 3_Tce_b3v08 blastn 34 58.4 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Phasmatodea Timematidae Timema Timema cristinae
15457419 15457419 PRJNA1009807_S_NODE_4593_length_156_cov_1.803419_g4565_i0 PRJNA1009807 4593 156 1.803419 2.81333364 Erpetoichthys calabaricus 27687 Chordata Chordata 189 9.39e-44   NTclustered gi|2327563545|ref|XM_051935314.1| 27687 g4565 i0 91.304 16.4551282051282 138 12 88 0 1 138 845 982 PREDICTED: Erpetoichthys calabaricus E3 SUMO-protein ligase ZBED1-like (LOC127529930), mRNA blastn 2567 189 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Erpetoichthys Erpetoichthys calabaricus
16303935 16303935 PRJNA1009807_S_NODE_773_length_336_cov_34.175084_g745_i0 PRJNA1009807 773 336 34.175084 114.82828224 Metazoa 33208 Porifera other_Eukaryota 99 4.01e-16   NTclustered gi|1284883228|gb|KY825184.1| 178514 g745 i0 79.452 7.19047619047619 146 24 43 4 193 336 3474 3333 Amphimedon compressa voucher MNRJ:18771 internal transcribed spacer 2 and 28S ribosomal RNA gene, partial sequence blastn 2416 99 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon compressa
18853104 18853104 PRJNA1009807_S_NODE_3635_length_171_cov_4.439394_g3607_i0 PRJNA1009807 3635 171 4.439394 7.59136374 Artemia 6660 Arthropoda Arthropoda 316 4.6e-82   NTclustered gi|2295022767|gb|OP365120.1| 6661 g3607 i0 100 100.035087719298 171 0 100 0 1 171 756 586 Artemia franciscana isolate soni103 small subunit ribosomal RNA gene, partial sequence blastn 17106 316 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
20127852 20127852 PRJNA1009807_S_NODE_2596_length_196_cov_501.490446_g2568_i0 PRJNA1009807 2596 196 501.490446 982.92127416 root 1 Root_unresolved Root_unresolved 357 3.2099999999999996e-94   NTclustered gi|78097480|gb|AC167666.4| 7176 g2568 i0 100 290.489795918367 193 0 98 0 4 196 1179 987 Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940120D9, complete sequence blastn 56936 357 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Culicidae Culex Culex quinquefasciatus
26907941 26907941 PRJNA1009807_S_NODE_122_length_663_cov_3.791667_g105_i0 PRJNA1009807 122 663 3.791667 25.13875221 Trichuris suis 68888 Nematoda Nematoda 52.4 6.44e-4   NR KFD59988.1 68888 g105 i0 41.3 0.470588235294118 104 51 43 3 466 182 207 309 KFD59988.1 LOW QUALITY PROTEIN: hypothetical protein M514_27836 [Trichuris suis] diamond 312 52.4 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
27603429 27603429 PRJNA1009807_S_NODE_4064_length_164_cov_1.480000_g4036_i0 PRJNA1009807 4064 164 1.48 2.4272 Paragonimus westermani 34504 Platyhelminthes Platyhelminthes 57.4 8.58e-8   NR KAA3669829.1 34504 g4036 i0 54 1.82926829268293 50 23 91.5 0 162 13 180 229 KAA3669829.1 uncharacterized protein DEA37_0001408, partial [Paragonimus westermani] diamond 300 57.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus westermani
27824400 27824400 PRJNA1009807_S_NODE_1864_length_227_cov_2.148936_g1836_i0 PRJNA1009807 1864 227 2.148936 4.87808472 Porites lobata 104759 Cnidaria other_Eukaryota 42.7 0.0298   NR CAH3174760.1 104759 g1836 i0 50 0.475770925110132 36 18 47.6 0 46 153 363 398 CAH3174760.1 unnamed protein product [Porites lobata] diamond 108 42.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites lobata
27887285 27887285 PRJNA1009807_S_NODE_2725_length_192_cov_2.320261_g2697_i0 PRJNA1009807 2725 192 2.320261 4.45490112 Anthophora plagiata 597819 Arthropoda Arthropoda 43.9 0.00747   NR CAK9813121.1 597819 g2697 i0 48.6 2.734375 35 18 54.7 0 40 144 222 256 CAK9813121.1 Transposable element Tc1 transposase [Anthophora plagiata] diamond 525 44.3 0.99097065462754 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Apidae Anthophora Anthophora plagiata
28992807 28992807 PRJNA1009807_S_NODE_3148_length_182_cov_1.202797_g3120_i0 PRJNA1009807 3148 182 1.202797 2.18909054 Petrolisthes cinctipes 88211 Arthropoda Arthropoda 99.8 1.4000000000000002e-22   NR KAK3884497.1 88211 g3120 i0 70 1.96153846153846 60 18 98.9 0 2 181 139 198 KAK3884497.1 hypothetical protein Pcinc_011235 [Petrolisthes cinctipes] diamond 357 99.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Decapoda Porcellanidae Petrolisthes Petrolisthes cinctipes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;