contig_metadata
5 rows where bioproject = "PRJNA1008624" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12908356 | 12908356 | PRJNA1008624_P_NODE_6891_length_319_cov_8.729630_g6703_i0 | PRJNA1008624 | 6891 | 319 | 8.72963 | 27.8475197 | Desulfovibrio subterraneus | 2718620 | Bacteria | Bacteria | 147 | 1.33e-30 | NTclustered | gi|2419088003|gb|CP087381.1| | 2718620 | g6703 | i0 | 79.018 | 101.495297805643 | 224 | 39 | 69 | 7 | 29 | 248 | 1200995 | 1200776 | Desulfovibrio subterraneus strain ND17 chromosome, complete genome | blastn | 32377 | 147 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio subterraneus | ||
| 26591023 | 26591023 | PRJNA1008624_P_NODE_22881_length_182_cov_1.315789_g22693_i0 | PRJNA1008624 | 22881 | 182 | 1.315789 | 2.39473598 | Desulfovibrio falkowii | 3136602 | Bacteria | Bacteria | 55.5 | 5.27e-7 | NR | WP_407844967.1 | 3136602 | g22693 | i0 | 51.9 | 3.70879120879121 | 52 | 22 | 80.8 | 1 | 5 | 151 | 114 | 165 | WP_407844967.1 type II restriction endonuclease [Desulfovibrio falkowii] | diamond | 675 | 55.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio falkowii | ||
| 26717546 | 26717546 | PRJNA1008624_P_NODE_28461_length_168_cov_0.873950_g28273_i0 | PRJNA1008624 | 28461 | 168 | 0.87395 | 1.468236 | Smithella sp. | 2053614 | Bacteria | Bacteria | 53.9 | 1.5e-6 | NR | MEN6621322.1 | 2053614 | g28273 | i0 | 63.6 | 1.17857142857143 | 33 | 12 | 58.9 | 0 | 164 | 66 | 25 | 57 | MEN6621322.1 hypothetical protein [Smithella sp.] | diamond | 198 | 53.9 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Smithellaceae | Smithella | Smithella sp. | ||
| 27666542 | 27666542 | PRJNA1008624_P_NODE_36704_length_162_cov_0.920354_g36516_i0 | PRJNA1008624 | 36704 | 162 | 0.920354 | 1.49097348 | Candidatus Dadabacteria bacterium | 2080303 | Bacteria | Bacteria | 52.8 | 3.03e-6 | NR | NIQ16564.1 | 2080303 | g36516 | i0 | 45.1 | 0.944444444444444 | 51 | 28 | 94.4 | 0 | 8 | 160 | 190 | 240 | NIQ16564.1 PBSX family phage terminase large subunit [Candidatus Dadabacteria bacterium] | diamond | 153 | 52.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Candidatus Dadabacteria | Candidatus Dadabacteria bacterium | |||||
| 32815721 | 32815721 | PRJNA1008624_P_NODE_4120_length_421_cov_5.567204_g3933_i0 | PRJNA1008624 | 4120 | 421 | 5.567204 | 23.43792884 | uncultured Desulfobacterium sp. | 201089 | Bacteria | Bacteria | 62.4 | 1.49e-9 | NR | CBX28568.1 | 201089 | g3933 | i0 | 43 | 0.612826603325416 | 86 | 44 | 59.9 | 2 | 275 | 24 | 3 | 85 | CBX28568.1 hypothetical protein N47_G38920 [uncultured Desulfobacterium sp.] | diamond | 258 | 62.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteriaceae | Desulfobacterium | uncultured Desulfobacterium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;