RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1008624", tax_phylum = "Promethearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Promethearchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1008624 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27761371 27761371 PRJNA1008624_P_NODE_16944_length_207_cov_0.898734_g16756_i0 PRJNA1008624 16944 207 0.898734 1.86037938 Promethearchaeia archaeon 3067280 Archaea Archaea 110 2.48e-26   NR MFO7795213.1 3067280 g16756 i0 76.5 0.985507246376812 68 16 98.6 0 4 207 825 892 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 204 110 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
32311050 32311050 PRJNA1008624_P_NODE_14259_length_223_cov_1.109195_g14071_i0 PRJNA1008624 14259 223 1.109195 2.47350485 Promethearchaeia archaeon 3067280 Archaea Archaea 64.3 6.97e-10   NR MFO7795213.1 3067280 g14071 i0 73.7 0.511210762331839 38 10 51.1 0 125 12 1 38 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 114 64.3 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
32500803 32500803 PRJNA1008624_P_NODE_22659_length_183_cov_1.119403_g22471_i0 PRJNA1008624 22659 183 1.119403 2.04850749 Promethearchaeia archaeon 3067280 Archaea Archaea 103 8.49e-24   NR MFO7795213.1 3067280 g22471 i0 81.4 0.967213114754098 59 11 96.7 0 178 2 718 776 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 177 103 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;