RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1008624", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1008624 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27918870 27918870 PRJNA1008624_P_NODE_10865_length_253_cov_1.588235_g10677_i0 PRJNA1008624 10865 253 1.588235 4.01823455 Nitrososphaerales archaeon 2268197 Archaea Archaea 76.3 6.42e-14   NR MFI5406628.1 2268197 g10677 i0 58.7 0.889328063241107 75 31 88.9 0 248 24 491 565 MFI5406628.1 hAT transposon family protein [Nitrososphaerales archaeon] diamond 225 76.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon
27918880 27918880 PRJNA1008624_P_NODE_27865_length_169_cov_0.866667_g27677_i0 PRJNA1008624 27865 169 0.866667 1.46466723 Nitrososphaera sp. 1971748 Archaea Archaea 71.2 1.17e-12   NR MCI0563357.1 1971748 g27677 i0 56.6 0.940828402366864 53 23 94.1 0 4 162 349 401 MCI0563357.1 SNF2-related protein [Nitrososphaera sp.] diamond 159 71.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
29024426 29024426 PRJNA1008624_P_NODE_35388_length_163_cov_0.912281_g35200_i0 PRJNA1008624 35388 163 0.912281 1.48701803 Nitrososphaera sp. 1971748 Archaea Archaea 60.8 8.51e-10   NR HEX2556991.1 1971748 g35200 i0 55.8 0.957055214723926 52 23 95.7 0 157 2 95 146 HEX2556991.1 hypothetical protein [Nitrososphaera sp.] diamond 156 60.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;