contig_metadata
10 rows where bioproject = "PRJNA1008624", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7806753 | 7806753 | PRJNA1008624_P_NODE_21767_length_186_cov_1.138686_g21579_i0 | PRJNA1008624 | 21767 | 186 | 1.138686 | 2.11795596 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 206 | 1.15e-48 | NTclustered | gi|2907625649|emb|OZ223209.1| | 2818507 | g21579 | i0 | 89.571 | 456.376344086022 | 163 | 16 | 87 | 1 | 21 | 182 | 5219126 | 5218964 | MAG: Myxococcota bacterium isolate 6e5ad1d4-156e-4916-952c-8a0b14857fe9 genome assembly, chromosome: 1 | blastn | 84886 | 206 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 16730961 | 16730961 | PRJNA1008624_P_NODE_17394_length_204_cov_1.632258_g17206_i0 | PRJNA1008624 | 17394 | 204 | 1.632258 | 3.32980632 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 355 | 1.21e-93 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g17206 | i0 | 98.039 | 179.583333333333 | 204 | 4 | 100 | 0 | 1 | 204 | 3944282 | 3944079 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 36635 | 355 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 18006333 | 18006333 | PRJNA1008624_P_NODE_4635_length_394_cov_2.973913_g4448_i0 | PRJNA1008624 | 4635 | 394 | 2.973913 | 11.71721722 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 641 | 1.7599999999999998e-179 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g4448 | i0 | 96.867 | 157.187817258883 | 383 | 12 | 97 | 0 | 1 | 383 | 3942854 | 3942472 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 61932 | 641 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 27002650 | 27002650 | PRJNA1008624_P_NODE_6902_length_319_cov_2.085185_g6714_i0 | PRJNA1008624 | 6902 | 319 | 2.085185 | 6.65174015 | Myxococcaceae bacterium | 2484252 | Bacteria | Bacteria | 199 | 7.459999999999999e-61 | NR | HKD38656.1 | 2484252 | g6714 | i0 | 92.4 | 2.96238244514107 | 105 | 8 | 98.7 | 0 | 317 | 3 | 92 | 196 | HKD38656.1 plasmid partitioning protein RepA [Myxococcaceae bacterium] | diamond | 945 | 199 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcaceae bacterium | |||
| 27824391 | 27824391 | PRJNA1008624_P_NODE_32564_length_165_cov_0.896552_g32376_i0 | PRJNA1008624 | 32564 | 165 | 0.896552 | 1.4793108 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 42.4 | 0.0176 | NR | HVK87281.1 | 2212474 | g32376 | i0 | 40.9 | 0.8 | 44 | 24 | 76.4 | 1 | 21 | 146 | 317 | 360 | HVK87281.1 hypothetical protein [Kofleriaceae bacterium] | diamond | 132 | 42.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 28676841 | 28676841 | PRJNA1008624_P_NODE_28147_length_168_cov_1.369748_g27959_i0 | PRJNA1008624 | 28147 | 168 | 1.369748 | 2.30117664 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 70.5 | 4.69e-13 | NR | HHH30778.1 | 2268199 | g27959 | i0 | 68.9 | 2.41071428571429 | 45 | 14 | 80.4 | 0 | 6 | 140 | 137 | 181 | HHH30778.1 HNH endonuclease [Polyangiaceae bacterium] | diamond | 405 | 70.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 30034609 | 30034609 | PRJNA1008624_P_NODE_22271_length_184_cov_1.362963_g22083_i0 | PRJNA1008624 | 22271 | 184 | 1.362963 | 2.50785192 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 50.8 | 1.98e-5 | NR | HSN30000.1 | 2212474 | g22083 | i0 | 58.1 | 0.701086956521739 | 43 | 16 | 70.1 | 1 | 182 | 54 | 142 | 182 | HSN30000.1 hypothetical protein [Kofleriaceae bacterium] | diamond | 129 | 50.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 30634650 | 30634650 | PRJNA1008624_P_NODE_18253_length_200_cov_0.927152_g18065_i0 | PRJNA1008624 | 18253 | 200 | 0.927152 | 1.854304 | Anaeromyxobacteraceae bacterium | 2510643 | Bacteria | Bacteria | 63.5 | 1.11e-10 | NR | HSM93365.1 | 2510643 | g18065 | i0 | 66.7 | 0.72 | 48 | 13 | 69 | 2 | 61 | 198 | 27 | 73 | HSM93365.1 SLOG family protein [Anaeromyxobacteraceae bacterium] | diamond | 144 | 63.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacteraceae bacterium | |||
| 31077316 | 31077316 | PRJNA1008624_P_NODE_35755_length_163_cov_0.912281_g35567_i0 | PRJNA1008624 | 35755 | 163 | 0.912281 | 1.48701803 | Myxococcaceae bacterium | 2484252 | Bacteria | Bacteria | 93.2 | 1.76e-22 | NR | MEI6806910.1 | 2484252 | g35567 | i0 | 84.6 | 2.87116564417178 | 52 | 8 | 95.7 | 0 | 159 | 4 | 83 | 134 | MEI6806910.1 hypothetical protein [Myxococcaceae bacterium] | diamond | 468 | 93.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcaceae bacterium | |||
| 31298372 | 31298372 | PRJNA1008624_P_NODE_13115_length_232_cov_0.814208_g12927_i0 | PRJNA1008624 | 13115 | 232 | 0.814208 | 1.88896256 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 152 | 1.58e-45 | NR | HPH68572.1 | 2212474 | g12927 | i0 | 96.1 | 0.982758620689655 | 76 | 3 | 98.3 | 0 | 231 | 4 | 11 | 86 | HPH68572.1 hypothetical protein [Kofleriaceae bacterium] | diamond | 228 | 152 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;