RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1008624" and tax_phylum = "Cossaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1008624 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21831317 21831317 PRJNA1008624_P_NODE_37158_length_162_cov_0.876106_g36970_i0 PRJNA1008624 37158 162 0.876106 1.41929172 parvo-like hybrid virus 3367306 Viruses Viruses 130 6.05e-26   NTclustered gi|2814138522|gb|PQ313124.1| 3367306 g36970 i0 88.679 1.30864197530864 106 12 65 0 1 106 1136 1241 Parvo-like hybrid virus isolate SpinColumn09, partial genome blastn 212 130 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   parvo-like hybrid virus
22678185 22678185 PRJNA1008624_P_NODE_3958_length_431_cov_2.811518_g3772_i0 PRJNA1008624 3958 431 2.811518 12.11764258 Viruses 10239 Viruses Viruses 787 0   NTclustered gi|2819064707|gb|PQ150501.1| 3042448 g3772 i0 99.767 3.65661252900232 429 1 99 0 1 429 907 479 MAG: Psittaciform parvoviridae sp. isolate Hebei_059 genomic sequence blastn 1576 787 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Psittaciform parvoviridae sp.
24380313 24380313 PRJNA1008624_P_NODE_24940_length_175_cov_1.587302_g24752_i0 PRJNA1008624 24940 175 1.587302 2.7777785 Protoparvovirus carnivoran1 3052707 Viruses Viruses 285 1.3399999999999998e-72   NTclustered gi|2471521096|gb|OQ198142.1| 10788 g24752 i0 96.512 8.44 172 6 98 0 4 175 939 1110 MAG: Canine parvovirus isolate ParvoviridaeDogfe362C6 genomic sequence blastn 1477 285 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Protoparvovirus Protoparvovirus carnivoran1
30287657 30287657 PRJNA1008624_P_NODE_23892_length_179_cov_0.969231_g23704_i0 PRJNA1008624 23892 179 0.969231 1.73492349 Psittaciform aveparvovirus 3042447 Viruses Viruses 48.1 1.94e-4   NR WGL41068.1 3042447 g23704 i0 49 0.854748603351955 51 18 80.4 2 165 22 15 60 WGL41068.1 replication protein [Psittaciform aveparvovirus] diamond 153 48.1 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Aveparvovirus Psittaciform aveparvovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;