contig_metadata
5 rows where bioproject = "PRJNA1008624" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1001297 | 1001297 | PRJNA1008624_P_NODE_11841_length_243_cov_0.902062_g11653_i0 | PRJNA1008624 | 11841 | 243 | 0.902062 | 2.1920106600000002 | Peredibacter | 263370 | Bacteria | Bacteria | 339 | 1.4999999999999997e-88 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g11653 | i0 | 92.083 | 92.3868312757202 | 240 | 19 | 99 | 0 | 1 | 240 | 510923 | 510684 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 22450 | 339 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 22678199 | 22678199 | PRJNA1008624_P_NODE_838_length_941_cov_6.155830_g722_i0 | PRJNA1008624 | 838 | 941 | 6.15583 | 57.9263603 | Silvanigrellaceae | 2024974 | Bacteria | Bacteria | 97.1 | 4.33e-15 | NTclustered | gi|1114626566|gb|CP017834.1| | 1915309 | g722 | i0 | 85.417 | 18.788522848034 | 96 | 10 | 10 | 4 | 840 | 933 | 390965 | 390872 | Silvanigrella aquatica strain MWH-Nonnen-W8red chromosome | blastn | 17680 | 97.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Silvanigrella | Silvanigrella aquatica | ||
| 26869007 | 26869007 | PRJNA1008624_P_NODE_29841_length_167_cov_0.881356_g29653_i0 | PRJNA1008624 | 29841 | 167 | 0.881356 | 1.47186452 | Bdellovibrionota | 3018035 | Bacteria | Bacteria | 99 | 1.78e-22 | NR | OFY99854.1 | 1797385 | g29653 | i0 | 81.5 | 10.6706586826347 | 54 | 10 | 97 | 0 | 3 | 164 | 447 | 500 | OFY99854.1 MAG: glutamine-hydrolyzing GMP synthase [Bdellovibrionales bacterium GWB1_52_6] | diamond | 1782 | 100 | 0.99 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium GWB1_52_6 | ||||
| 30824354 | 30824354 | PRJNA1008624_P_NODE_14234_length_223_cov_1.247126_g14046_i0 | PRJNA1008624 | 14234 | 223 | 1.247126 | 2.78109098 | Bdellovibrio sp. 28-41-41 | 1970323 | Bacteria | Bacteria | 46.2 | 0.00169 | NR | OYZ19547.1 | 1970323 | g14046 | i0 | 42.9 | 0.753363228699552 | 56 | 28 | 71.3 | 2 | 7 | 165 | 320 | 374 | OYZ19547.1 MAG: hypothetical protein B7Y39_12015 [Bdellovibrio sp. 28-41-41] | diamond | 168 | 46.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. 28-41-41 | ||
| 32469158 | 32469158 | PRJNA1008624_P_NODE_21219_length_188_cov_1.035971_g21031_i0 | PRJNA1008624 | 21219 | 188 | 1.035971 | 1.94762548 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 56.6 | 2.25e-7 | NR | HUP58499.1 | 3034175 | g21031 | i0 | 46 | 0.797872340425532 | 50 | 27 | 79.8 | 0 | 35 | 184 | 112 | 161 | HUP58499.1 FtsX-like permease family protein [Bdellovibrionota bacterium] | diamond | 150 | 56.6 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;