RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1008624" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 4 ✖

bioproject 1

  • PRJNA1008624 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27128869 27128869 PRJNA1008624_P_NODE_13202_length_231_cov_1.126374_g13014_i0 PRJNA1008624 13202 231 1.126374 2.60192394 Methanosarcina sp. 2213 Archaea Archaea 127 1.45e-32   NR HET8685948.1 2213 g13014 i0 80.5 1 77 15 100 0 231 1 74 150 HET8685948.1 phage terminase large subunit [Methanosarcina sp.] diamond 231 127 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
30097581 30097581 PRJNA1008624_P_NODE_15872_length_213_cov_0.932927_g15684_i0 PRJNA1008624 15872 213 0.932927 1.98713451 Methanosarcina sp. 2213 Archaea Archaea 87.4 1.8e-19   NR HET8687536.1 2213 g15684 i0 57.6 0.929577464788732 66 27 93 1 200 3 84 148 HET8687536.1 hypothetical protein [Methanosarcina sp.] diamond 198 87.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
31101123 31101123 PRJNA1008624_P_NODE_35095_length_163_cov_0.912281_g34907_i0 PRJNA1008624 35095 163 0.912281 1.48701803 root 1 Root_unresolved Root_unresolved 102 6.139999999999999e-24   NR OPY47876.1 1811726 g34907 i0 82.4 8.42944785276074 51 9 93.9 0 6 158 233 283 OPY47876.1 MAG: hypothetical protein A4E42_00230 [Methanoregulaceae archaeon PtaU1.Bin222] diamond 1374 102 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon PtaU1.Bin222
31354276 31354276 PRJNA1008624_P_NODE_26376_length_171_cov_1.131148_g26188_i0 PRJNA1008624 26376 171 1.131148 1.93426308 root 1 Root_unresolved Root_unresolved 55.8 3.27e-7   NR HET8686566.1 2213 g26188 i0 67.6 1.78947368421053 34 11 59.6 0 106 5 1 34 HET8686566.1 hypothetical protein [Methanosarcina sp.] diamond 306 55.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;