contig_metadata
19 rows where bioproject = "PRJNA1008624", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2704629 | 2704629 | PRJNA1008624_P_NODE_29563_length_167_cov_0.881356_g29375_i0 | PRJNA1008624 | 29563 | 167 | 0.881356 | 1.47186452 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 117 | 6.83e-29 | NR | MDH4476474.1 | 2026800 | g29375 | i0 | 100 | 0.970059880239521 | 54 | 0 | 97 | 0 | 2 | 163 | 716 | 769 | MDH4476474.1 DEAD/DEAH box helicase [Verrucomicrobiaceae bacterium] | diamond | 162 | 117 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 10357519 | 10357519 | PRJNA1008624_P_NODE_30189_length_167_cov_0.881356_g30001_i0 | PRJNA1008624 | 30189 | 167 | 0.881356 | 1.47186452 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 101 | 3.4e-26 | NR | MDA0814886.1 | 2026799 | g30001 | i0 | 100 | 1.8502994011976 | 49 | 0 | 88 | 0 | 2 | 148 | 68 | 116 | MDA0814886.1 DNA methyltransferase [Verrucomicrobiota bacterium] | diamond | 309 | 101 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 26591017 | 26591017 | PRJNA1008624_P_NODE_12621_length_236_cov_0.994652_g12433_i0 | PRJNA1008624 | 12621 | 236 | 0.994652 | 2.34737872 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 85.1 | 1.09e-18 | NR | MEI7534237.1 | 2499141 | g12433 | i0 | 64.4 | 0.75 | 59 | 21 | 75 | 0 | 5 | 181 | 92 | 150 | MEI7534237.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 177 | 85.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 27571623 | 27571623 | PRJNA1008624_P_NODE_35144_length_163_cov_0.912281_g34956_i0 | PRJNA1008624 | 35144 | 163 | 0.912281 | 1.48701803 | Prosthecobacter debontii | 48467 | Bacteria | Bacteria | 77.8 | 5.32e-15 | NR | WP_139373074.1 | 48467 | g34956 | i0 | 63.5 | 0.957055214723926 | 52 | 19 | 95.7 | 0 | 161 | 6 | 477 | 528 | WP_139373074.1 DNA methyltransferase [Prosthecobacter debontii] | diamond | 156 | 77.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter debontii | |
| 27603422 | 27603422 | PRJNA1008624_P_NODE_33644_length_164_cov_0.904348_g33456_i0 | PRJNA1008624 | 33644 | 164 | 0.904348 | 1.48313072 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 67 | 3.47e-11 | NR | MEI7912756.1 | 2026799 | g33456 | i0 | 62.5 | 1.82926829268293 | 48 | 18 | 87.8 | 0 | 148 | 5 | 299 | 346 | MEI7912756.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 300 | 67 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27761380 | 27761380 | PRJNA1008624_P_NODE_28824_length_168_cov_0.873950_g28636_i0 | PRJNA1008624 | 28824 | 168 | 0.87395 | 1.468236 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 111 | 1.03e-26 | NR | MEN9675717.1 | 2026799 | g28636 | i0 | 96.4 | 0.982142857142857 | 55 | 2 | 98.2 | 0 | 1 | 165 | 595 | 649 | MEN9675717.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 165 | 111 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28266040 | 28266040 | PRJNA1008624_P_NODE_25386_length_174_cov_1.192000_g25198_i0 | PRJNA1008624 | 25386 | 174 | 1.192 | 2.07408 | Luteolibacter pohnpeiensis | 454153 | Bacteria | Bacteria | 81.3 | 9.92e-17 | NR | WP_200273539.1 | 454153 | g25198 | i0 | 61.4 | 0.982758620689655 | 57 | 22 | 98.3 | 0 | 172 | 2 | 81 | 137 | WP_200273539.1 phage protease [Luteolibacter pohnpeiensis] | diamond | 171 | 81.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter pohnpeiensis | |
| 29623445 | 29623445 | PRJNA1008624_P_NODE_34750_length_163_cov_1.350877_g34562_i0 | PRJNA1008624 | 34750 | 163 | 1.350877 | 2.20192951 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 67.4 | 2.54e-11 | NR | MBP7950373.1 | 2026801 | g34562 | i0 | 58.5 | 0.975460122699387 | 53 | 22 | 97.5 | 0 | 2 | 160 | 213 | 265 | MBP7950373.1 hypothetical protein [Verrucomicrobiales bacterium] | diamond | 159 | 67.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium | |||
| 29686805 | 29686805 | PRJNA1008624_P_NODE_33730_length_164_cov_0.904348_g33542_i0 | PRJNA1008624 | 33730 | 164 | 0.904348 | 1.48313072 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 77.4 | 6.74e-15 | NR | HOX60287.1 | 2026799 | g33542 | i0 | 64.7 | 0.932926829268293 | 51 | 18 | 93.3 | 0 | 155 | 3 | 199 | 249 | HOX60287.1 helicase-related protein [Verrucomicrobiota bacterium] | diamond | 153 | 77.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30027166 | 30027166 | PRJNA1008624_P_NODE_24731_length_176_cov_1.220472_g24543_i0 | PRJNA1008624 | 24731 | 176 | 1.220472 | 2.14803072 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 98.6 | 2.32e-22 | NR | MEI6590165.1 | 2026799 | g24543 | i0 | 73.7 | 7.70454545454545 | 57 | 15 | 97.2 | 0 | 5 | 175 | 36 | 92 | MEI6590165.1 terminase family protein [Verrucomicrobiota bacterium] | diamond | 1356 | 99.4 | 0.991951710261569 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30382475 | 30382475 | PRJNA1008624_P_NODE_14493_length_221_cov_2.040698_g14305_i0 | PRJNA1008624 | 14493 | 221 | 2.040698 | 4.50994258 | Pedosphaera sp. | 2024890 | Bacteria | Bacteria | 42.4 | 0.0268 | NR | MSR66356.1 | 2024890 | g14305 | i0 | 47.6 | 0.570135746606335 | 42 | 22 | 57 | 0 | 201 | 76 | 110 | 151 | MSR66356.1 50S ribosomal protein L5 [Pedosphaera sp.] | diamond | 126 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera sp. | |
| 30880070 | 30880070 | PRJNA1008624_P_NODE_27294_length_169_cov_0.866667_g27106_i0 | PRJNA1008624 | 27294 | 169 | 0.866667 | 1.46466723 | PVC group | 1783257 | Bacteria | Bacteria | 61.6 | 2.08e-9 | NR | NDA10765.1 | 2026799 | g27106 | i0 | 44.2 | 3.69230769230769 | 52 | 29 | 92.3 | 0 | 161 | 6 | 142 | 193 | NDA10765.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 624 | 61.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30887588 | 30887588 | PRJNA1008624_P_NODE_34234_length_164_cov_0.904348_g34046_i0 | PRJNA1008624 | 34234 | 164 | 0.904348 | 1.48313072 | Opitutus sp. | 1913982 | Bacteria | Bacteria | 51.2 | 4.51e-6 | NR | MCR6655395.1 | 1913982 | g34046 | i0 | 44.2 | 1.90243902439024 | 52 | 29 | 95.1 | 0 | 6 | 161 | 57 | 108 | MCR6655395.1 hypothetical protein [Opitutus sp.] | diamond | 312 | 51.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. | |
| 31013941 | 31013941 | PRJNA1008624_P_NODE_23695_length_179_cov_1.576923_g23507_i0 | PRJNA1008624 | 23695 | 179 | 1.576923 | 2.82269217 | Luteolibacter marinus | 2776705 | Bacteria | Bacteria | 54.7 | 9.57e-7 | NR | WP_226895735.1 | 2776705 | g23507 | i0 | 65.2 | 0.770949720670391 | 46 | 14 | 73.7 | 1 | 44 | 175 | 2 | 47 | WP_226895735.1 phage portal protein family protein [Luteolibacter marinus] | diamond | 138 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter marinus | |
| 31013944 | 31013944 | PRJNA1008624_P_NODE_31555_length_166_cov_0.888889_g31367_i0 | PRJNA1008624 | 31555 | 166 | 0.888889 | 1.47555574 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 80.1 | 3.54e-16 | NR | MEI6605146.1 | 2026799 | g31367 | i0 | 64.8 | 1.87951807228916 | 54 | 19 | 97.6 | 0 | 164 | 3 | 123 | 176 | MEI6605146.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 312 | 80.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31361855 | 31361855 | PRJNA1008624_P_NODE_35356_length_163_cov_0.912281_g35168_i0 | PRJNA1008624 | 35356 | 163 | 0.912281 | 1.48701803 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 44.3 | 0.00362 | NR | MCD6048717.1 | 2026799 | g35168 | i0 | 42 | 0.920245398773006 | 50 | 29 | 92 | 0 | 13 | 162 | 236 | 285 | MCD6048717.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 150 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32089246 | 32089246 | PRJNA1008624_P_NODE_27178_length_169_cov_0.866667_g26990_i0 | PRJNA1008624 | 27178 | 169 | 0.866667 | 1.46466723 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 47.4 | 1.91e-4 | NR | NBR96056.1 | 2026799 | g26990 | i0 | 42.2 | 0.798816568047337 | 45 | 26 | 79.9 | 0 | 143 | 9 | 56 | 100 | NBR96056.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 135 | 47.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32721327 | 32721327 | PRJNA1008624_P_NODE_30160_length_167_cov_0.881356_g29972_i0 | PRJNA1008624 | 30160 | 167 | 0.881356 | 1.47186452 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 42 | 0.0248 | NR | HZI57841.1 | 2499141 | g29972 | i0 | 39.2 | 0.916167664670659 | 51 | 28 | 88 | 2 | 1 | 147 | 149 | 198 | HZI57841.1 alpha/beta hydrolase [Verrucomicrobiia bacterium] | diamond | 153 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 32721331 | 32721331 | PRJNA1008624_P_NODE_35360_length_163_cov_0.912281_g35172_i0 | PRJNA1008624 | 35360 | 163 | 0.912281 | 1.48701803 | Opitutus sp. ER46 | 2161864 | Bacteria | Bacteria | 62.4 | 4.99e-10 | NR | WP_107835476.1 | 2161864 | g35172 | i0 | 65.4 | 0.957055214723926 | 52 | 18 | 95.7 | 0 | 159 | 4 | 138 | 189 | WP_107835476.1 hypothetical protein [Opitutus sp. ER46] | diamond | 156 | 62.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. ER46 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;