contig_metadata
6 rows where bioproject = "PRJNA1008624", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26781438 | 26781438 | PRJNA1008624_P_NODE_27881_length_169_cov_0.866667_g27693_i0 | PRJNA1008624 | 27881 | 169 | 0.866667 | 1.46466723 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 85.5 | 1.13e-17 | NR | MCH9634803.1 | 2081524 | g27693 | i0 | 75.5 | 1.91715976331361 | 53 | 13 | 94.1 | 0 | 9 | 167 | 301 | 353 | MCH9634803.1 Arginine--tRNA ligase [Chlamydiota bacterium] | diamond | 324 | 85.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 26844868 | 26844868 | PRJNA1008624_P_NODE_33881_length_164_cov_0.904348_g33693_i0 | PRJNA1008624 | 33881 | 164 | 0.904348 | 1.48313072 | Chlamydiota bacterium | 2081524 | Bacteria | Bacteria | 41.6 | 0.0326 | NR | MCH9633308.1 | 2081524 | g33693 | i0 | 66.7 | 0.49390243902439 | 27 | 9 | 49.4 | 0 | 45 | 125 | 1 | 27 | MCH9633308.1 Glucokinase [Chlamydiota bacterium] | diamond | 81 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiota bacterium | |||||
| 29150703 | 29150703 | PRJNA1008624_P_NODE_34869_length_163_cov_0.921053_g34681_i0 | PRJNA1008624 | 34869 | 163 | 0.921053 | 1.50131639 | Chlamydiae bacterium CG1 | 2081524 | Bacteria | Bacteria | 46.2 | 7.46e-4 | NR | PIS03286.1 | 1973936 | g34681 | i0 | 41.5 | 0.975460122699387 | 53 | 26 | 88.3 | 1 | 4 | 147 | 133 | 185 | PIS03286.1 MAG: hypothetical protein COT85_00990 [Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_42_34] | diamond | 159 | 46.2 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_42_34 | |||||
| 29939919 | 29939919 | PRJNA1008624_P_NODE_36931_length_162_cov_0.920354_g36743_i0 | PRJNA1008624 | 36931 | 162 | 0.920354 | 1.49097348 | Rhabdochlamydiaceae bacterium | 2047756 | Bacteria | Bacteria | 49.3 | 5.81e-5 | NR | MBX9922702.1 | 2047756 | g36743 | i0 | 69 | 2.14814814814815 | 29 | 9 | 53.7 | 0 | 75 | 161 | 3 | 31 | MBX9922702.1 pyruvate dehydrogenase complex E1 component subunit beta [Rhabdochlamydiaceae bacterium] | diamond | 348 | 49.3 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Rhabdochlamydiaceae | Rhabdochlamydiaceae bacterium | ||
| 31741083 | 31741083 | PRJNA1008624_P_NODE_30837_length_166_cov_0.888889_g30649_i0 | PRJNA1008624 | 30837 | 166 | 0.888889 | 1.47555574 | Chlamydiia bacterium | 2052156 | Bacteria | Bacteria | 85.9 | 8.31e-20 | NR | MBI3508299.1 | 2052156 | g30649 | i0 | 78.8 | 0.939759036144578 | 52 | 11 | 94 | 0 | 6 | 161 | 23 | 74 | MBI3508299.1 VOC family protein [Chlamydiia bacterium] | diamond | 156 | 85.9 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiia bacterium | ||||
| 32279302 | 32279302 | PRJNA1008624_P_NODE_16079_length_212_cov_0.797546_g15891_i0 | PRJNA1008624 | 16079 | 212 | 0.797546 | 1.69079752 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 141 | 5.59e-40 | NR | MFI0436135.1 | 2052176 | g15891 | i0 | 100 | 0.990566037735849 | 70 | 0 | 99.1 | 0 | 3 | 212 | 55 | 124 | MFI0436135.1 terminase large subunit [Parachlamydiaceae bacterium] | diamond | 210 | 141 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;