RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1008624", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1008624 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27160646 27160646 PRJNA1008624_P_NODE_32402_length_165_cov_0.896552_g32214_i0 PRJNA1008624 32402 165 0.896552 1.4793108 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 62.8 1.5e-10   NR MCL5098508.1 2035772 g32214 i0 60 0.818181818181818 45 18 81.8 0 163 29 79 123 MCL5098508.1 helix-turn-helix domain-containing protein [Candidatus Omnitrophota bacterium] diamond 135 62.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31741087 31741087 PRJNA1008624_P_NODE_36777_length_162_cov_0.920354_g36589_i0 PRJNA1008624 36777 162 0.920354 1.49097348 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 70.9 6.63e-14   NR MCG3177603.1 2035772 g36589 i0 60.4 0.981481481481482 53 21 98.1 0 1 159 71 123 MCG3177603.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 159 70.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;