RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1008624", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1008624 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14182722 14182722 PRJNA1008624_P_NODE_16852_length_207_cov_1.417722_g16664_i0 PRJNA1008624 16852 207 1.417722 2.93468454 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 52.8 0.018   NTclustered gi|1869359902|gb|CP058732.1| 2447898 g16664 i0 100 0.135265700483092 28 0 14 0 100 127 340347 340320 MAG: Candidatus Kapaibacterium sp. isolate Ch6 chromosome, complete genome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
26749193 26749193 PRJNA1008624_P_NODE_26541_length_170_cov_1.570248_g26353_i0 PRJNA1008624 26541 170 1.570248 2.6694216 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 65.9 5.07e-11   NR TAE25487.1 2447898 g26353 i0 51.8 0.988235294117647 56 27 98.8 0 3 170 53 108 TAE25487.1 MAG: SAM-dependent methyltransferase [Candidatus Kapaibacterium sp.] diamond 168 65.9 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;