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contig_metadata

24 rows where bioproject = "PRJNA1005695" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA1005695 · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
153543 153543 PRJNA1005695_P_NODE_28861_length_278_cov_1.629268_g28009_i0 PRJNA1005695 28861 278 1.629268 4.52936504 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 453 5.999999999999999e-123   NTclustered gi|300078498|gb|GU001160.1| 5755 g28009 i0 96.39 22.0143884892086 277 6 99 2 2 278 5462 5734 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6120 453 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1428337 1428337 PRJNA1005695_P_NODE_35262_length_252_cov_0.871508_g34410_i0 PRJNA1005695 35262 252 0.871508 2.19620016 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 109 1.14e-25   NR XP_004345877.1 1257118 g34410 i0 61.4 0.988095238095238 83 31 97.6 1 251 6 1156 1238 XP_004345877.1 carbamoylphosphate synthase, large subunit, partial [Acanthamoeba castellanii str. Neff] diamond 249 109 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5256583 5256583 PRJNA1005695_P_NODE_5325_length_687_cov_41.035831_g4516_i0 PRJNA1005695 5325 687 41.035831 281.91615897 Vannella croatica 1778588 Discosea other_Eukaryota 1221 0   NTclustered gi|973761167|gb|KT345693.1| 1778588 g4516 i0 98.834 82.4425036390102 686 6 99 2 2 686 523 1207 Vannella croatica isolate KRKA 29.9.7.6.1 small subunit ribosomal RNA gene, partial sequence blastn 56638 1221 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella croatica
8654168 8654168 PRJNA1005695_P_NODE_14727_length_397_cov_2.166667_g13875_i0 PRJNA1005695 14727 397 2.166667 8.60166799 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 155 2.95e-41   NR XP_004341866.1 1257118 g13875 i0 61.8 1.94206549118388 131 48 98.2 2 2 391 249 378 XP_004341866.1 transmembrane 9 superfamily protein member 4, putative [Acanthamoeba castellanii str. Neff] diamond 771 155 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8654222 8654222 PRJNA1005695_P_NODE_22567_length_316_cov_1.683128_g21715_i0 PRJNA1005695 22567 316 1.683128 5.31868448 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 228 4.579999999999999e-55   NTclustered gi|1914009752|gb|MT975626.1| 1017091 g21715 i0 79.874 91.0284810126582 318 58 99 3 5 316 449 132 Cochliopodium larifeili cytochrome C oxidase subunit 1 gene, partial cds; mitochondrial blastn 28765 228 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
9080846 9080846 PRJNA1005695_P_NODE_10048_length_490_cov_3.179856_g9197_i0 PRJNA1005695 10048 490 3.179856 15.5812944 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 273 4.75e-90   NR XP_004355015.1 1257118 g9197 i0 80.5 1.86734693877551 154 30 94.3 0 463 2 1 154 XP_004355015.1 Factin-capping protein subunit beta, putative [Acanthamoeba castellanii str. Neff] diamond 915 275 0.992727272727273 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11631974 11631974 PRJNA1005695_P_NODE_13290_length_421_cov_1.988506_g12438_i0 PRJNA1005695 13290 421 1.988506 8.37161026 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 223 2.5199999999999998e-68   NR XP_004344078.1 1257118 g12438 i0 76.3 0.990498812351544 139 33 99 0 3 419 46 184 XP_004344078.1 Sadenosyl-L-homocysteine hydrolase, putative [Acanthamoeba castellanii str. Neff] diamond 417 223 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12907159 12907159 PRJNA1005695_P_NODE_19491_length_342_cov_1.724907_g18639_i0 PRJNA1005695 19491 342 1.724907 5.89918194 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 155 2.67e-45   NR XP_004339224.1 1257118 g18639 i0 65.8 0.973684210526316 111 38 97.4 0 8 340 72 182 XP_004339224.1 ribosomal L15, putative [Acanthamoeba castellanii str. Neff] diamond 333 155 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14182272 14182272 PRJNA1005695_P_NODE_35172_length_252_cov_0.871508_g34320_i0 PRJNA1005695 35172 252 0.871508 2.19620016 Paravannella minima 1443144 Discosea other_Eukaryota 466 6.89e-127   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g34320 i0 100 101.071428571429 252 0 100 0 1 252 2699 2448 Paravannella minima mitochondrion, complete genome blastn 25470 466 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
20127586 20127586 PRJNA1005695_P_NODE_3256_length_887_cov_2.630221_g2631_i0 PRJNA1005695 3256 887 2.630221 23.33006027 Acanthamoeba 5754 Discosea other_Eukaryota 394 1.2899999999999997e-104   NTclustered gi|881634|gb|U29610.1|ACU29610 5755 g2631 i0 77.075 17.5896279594138 711 145 79 16 1 702 610 1311 Acanthaoeba castellanii actin-related protein 3 Arp3 mRNA, complete cds blastn 15602 394 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23105704 23105704 PRJNA1005695_P_NODE_20979_length_329_cov_1.199219_g20127_i0 PRJNA1005695 20979 329 1.199219 3.94543051 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 164 5.1900000000000004e-49   NR XP_004339224.1 1257118 g20127 i0 72.6 2.89969604863222 106 29 96.7 0 328 11 88 193 XP_004339224.1 ribosomal L15, putative [Acanthamoeba castellanii str. Neff] diamond 954 164 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26876544 26876544 PRJNA1005695_P_NODE_29121_length_277_cov_1.460784_g28269_i0 PRJNA1005695 29121 277 1.460784 4.04637168 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 101 2.54e-25   NR 7SOG_A 5755 g28269 i0 49.4 0.92057761732852 85 43 92.1 0 257 3 4 88 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 255 101 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28518953 28518953 PRJNA1005695_P_NODE_4067_length_791_cov_1.800836_g3397_i0 PRJNA1005695 4067 791 1.800836 14.24461276 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 246 2.56e-70   NR XP_004344560.1 1257118 g3397 i0 47.6 2.04424778761062 273 121 99.7 4 3 791 444 704 XP_004344560.1 p53 inducible protein [Acanthamoeba castellanii str. Neff] diamond 1617 246 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29087292 29087292 PRJNA1005695_P_NODE_23748_length_308_cov_2.961702_g22896_i0 PRJNA1005695 23748 308 2.961702 9.12204216 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 73.2 1.62e-12   NR XP_004341000.1 1257118 g22896 i0 36.9 1.98701298701299 103 62 98.4 2 2 304 390 491 XP_004341000.1 RhoGAP domain containing protein [Acanthamoeba castellanii str. Neff] diamond 612 73.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29182076 29182076 PRJNA1005695_P_NODE_34649_length_253_cov_0.866667_g33797_i0 PRJNA1005695 34649 253 0.866667 2.19266751 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 149 9.49e-40   NR XP_004337289.1 1257118 g33797 i0 84.3 4.92094861660079 83 13 98.4 0 3 251 413 495 XP_004337289.1 eukaryotic translation elongation factor 2, putative [Acanthamoeba castellanii str. Neff] diamond 1245 149 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29623424 29623424 PRJNA1005695_P_NODE_32670_length_261_cov_1.127660_g31818_i0 PRJNA1005695 32670 261 1.12766 2.9431926 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 65.9 3.3e-10   NR XP_004356624.1 1257118 g31818 i0 46.3 2.83908045977011 80 24 92 2 259 20 150 210 XP_004356624.1 protein kinase domain containing protein [Acanthamoeba castellanii str. Neff] diamond 741 65.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29971287 29971287 PRJNA1005695_P_NODE_8331_length_542_cov_1.488273_g7486_i0 PRJNA1005695 8331 542 1.488273 8.06643966 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 148 1.4499999999999998e-37   NR XP_004368296.1 1257118 g7486 i0 44.1 0.990774907749078 179 94 98.5 4 5 538 618 791 XP_004368296.1 protein involved in vacuole import and degradation, putative [Acanthamoeba castellanii str. Neff] diamond 537 148 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30350968 30350968 PRJNA1005695_P_NODE_8092_length_550_cov_1.270440_g7254_i0 PRJNA1005695 8092 550 1.27044 6.98742 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 50.1 5.44e-4   NR XP_004337020.1 1257118 g7254 i0 91.7 0.130909090909091 24 2 13.1 0 252 181 141 164 XP_004337020.1 uncharacterized protein ACA1_211930 [Acanthamoeba castellanii str. Neff] diamond 72 50.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30382459 30382459 PRJNA1005695_P_NODE_32213_length_263_cov_1.231579_g31361_i0 PRJNA1005695 32213 263 1.231579 3.23905277 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 62.4 5.52e-9   NR XP_004346040.1 1257118 g31361 i0 50.8 0.718631178707224 63 31 71.9 0 54 242 378 440 XP_004346040.1 Solute carrier family 29 (nucleoside transporters), member 1, putative [Acanthamoeba castellanii str. Neff] diamond 189 62.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31488428 31488428 PRJNA1005695_P_NODE_37516_length_247_cov_0.896552_g36664_i0 PRJNA1005695 37516 247 0.896552 2.21448344 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 61.2 1.19e-8   NR XP_004338711.1 1257118 g36664 i0 39.5 0.983805668016194 81 39 98.4 2 247 5 271 341 XP_004338711.1 Dual specificity protein kinase [Acanthamoeba castellanii str. Neff] diamond 243 61.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31646147 31646147 PRJNA1005695_P_NODE_17277_length_364_cov_1.072165_g16425_i0 PRJNA1005695 17277 364 1.072165 3.9026806 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.5 2.6e-7   NR XP_004339305.1 1257118 g16425 i0 41.6 0.634615384615385 77 44 63.5 1 48 278 4 79 XP_004339305.1 Transmembrane protein, putative [Acanthamoeba castellanii str. Neff] diamond 231 58.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31804367 31804367 PRJNA1005695_P_NODE_40057_length_242_cov_0.923077_g39205_i0 PRJNA1005695 40057 242 0.923077 2.23384634 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 62.8 3.28e-9   NR XP_004333644.1 1257118 g39205 i0 50 3.0495867768595 60 30 74.4 0 185 6 272 331 XP_004333644.1 SNF2 family Nterminal domain containing protein [Acanthamoeba castellanii str. Neff] diamond 738 62.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32089208 32089208 PRJNA1005695_P_NODE_16018_length_379_cov_1.820261_g15166_i0 PRJNA1005695 16018 379 1.820261 6.89878919 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 179 6.859999999999999e-53   NR XP_004351681.1 1257118 g15166 i0 67.5 1.97097625329815 126 40 98.9 1 3 377 108 233 XP_004351681.1 thioredoxindisulfide reductase [Acanthamoeba castellanii str. Neff] diamond 747 179 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32500785 32500785 PRJNA1005695_P_NODE_28699_length_279_cov_1.514563_g27847_i0 PRJNA1005695 28699 279 1.514563 4.22563077 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 61.2 1.85e-8   NR XP_004342507.1 1257118 g27847 i0 31.9 0.978494623655914 91 62 97.8 0 2 274 2577 2667 XP_004342507.1 uncharacterized protein ACA1_184650 [Acanthamoeba castellanii str. Neff] diamond 273 61.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;