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contig_metadata

24 rows where bioproject = "PRJNA1005695", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 24 ✖

tax_phylum 1

  • Acidobacteriota · 24 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1005695 · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
153690 153690 PRJNA1005695_P_NODE_6921_length_596_cov_3.378585_g6090_i0 PRJNA1005695 6921 596 3.378585 20.1363666 Bryobacterales bacterium F-183 2802972 Bacteria Bacteria 752 0   NTclustered gi|2131941663|dbj|AP025252.1| 2802972 g6090 i0 91.32 102.578859060403 553 45 93 3 45 596 634952 635502 Bryobacterales bacterium F-183 DNA, nearly complete genome blastn 61137 752 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium F-183
1428261 1428261 PRJNA1005695_P_NODE_27562_length_285_cov_1.250000_g26710_i0 PRJNA1005695 27562 285 1.25 3.5625 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 52.8 0.026   NTclustered gi|2874253692|emb|OY969418.1| 171953 g26710 i0 100 0.0982456140350877 28 0 10 0 180 207 5483412 5483439 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
2703628 2703628 PRJNA1005695_P_NODE_15583_length_385_cov_1.355769_g14731_i0 PRJNA1005695 15583 385 1.355769 5.21971065 Acidobacteriota bacterium 1978231 Bacteria Bacteria 534 2.99e-147   NTclustered gi|1958098837|gb|CP065005.1| 1978231 g14731 i0 91.688 553.787012987013 385 32 100 0 1 385 4648950 4648566 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome blastn 213208 534 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
3979874 3979874 PRJNA1005695_P_NODE_22264_length_318_cov_1.934694_g21412_i0 PRJNA1005695 22264 318 1.934694 6.15232692 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 394 4.3e-105   NTclustered gi|2874253692|emb|OY969418.1| 171953 g21412 i0 89.028 126.455974842767 319 33 100 2 1 318 4232009 4231692 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 40213 394 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
3980111 3980111 PRJNA1005695_P_NODE_8584_length_534_cov_1.171367_g7738_i0 PRJNA1005695 8584 534 1.171367 6.25509978 Acidobacteriota bacterium 1978231 Bacteria Bacteria 752 0   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g7738 i0 92.037 142.104868913858 540 35 100 6 1 534 3299732 3299195 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 75884 752 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
5256417 5256417 PRJNA1005695_P_NODE_24285_length_304_cov_7.194805_g23433_i0 PRJNA1005695 24285 304 7.194805 21.8722072 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 257 5.59e-64   NTclustered gi|2874254108|emb|OY970193.1| 171953 g23433 i0 87.5 187.131578947368 224 26 74 2 5 228 1689585 1689364 MAG: uncultured Acidobacteriota bacterium isolate MFD09206.bin.1.42 genome assembly, chromosome: 1 blastn 56888 257 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
7806141 7806141 PRJNA1005695_P_NODE_35367_length_251_cov_1.988764_g34515_i0 PRJNA1005695 35367 251 1.988764 4.99179764 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 375 1.1899999999999998e-99   NTclustered gi|2874253796|emb|OY969780.1| 194844 g34515 i0 93.676 114.733067729084 253 12 100 3 1 251 285268 285018 MAG: uncultured Acidobacteriaceae bacterium isolate MFD09603.bin.c.4 genome assembly, chromosome: 1 blastn 28798 375 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
7806192 7806192 PRJNA1005695_P_NODE_39907_length_242_cov_1.526627_g39055_i0 PRJNA1005695 39907 242 1.526627 3.69443734 Bryobacterales bacterium F-183 2802972 Bacteria Bacteria 169 2.07e-37   NTclustered gi|2131941663|dbj|AP025252.1| 2802972 g39055 i0 81.132 0.87603305785124 212 38 87 2 32 242 4108587 4108797 Bryobacterales bacterium F-183 DNA, nearly complete genome blastn 212 169 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium F-183
10356745 10356745 PRJNA1005695_P_NODE_37049_length_248_cov_0.891429_g36197_i0 PRJNA1005695 37049 248 0.891429 2.21074392 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 226 1.2499999999999999e-54   NTclustered gi|112980870|gb|DQ829674.1| 171953 g36197 i0 83.065 131.084677419355 248 42 100 0 1 248 319 566 Uncultured Acidobacteria bacterium clone DON24 23S ribosomal RNA gene, partial sequence blastn 32509 226 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
13754624 13754624 PRJNA1005695_P_NODE_8031_length_552_cov_3.736952_g7193_i0 PRJNA1005695 8031 552 3.736952 20.62797504 Chloracidobacterium 458032 Bacteria Bacteria 665 0   NTclustered gi|470487921|ref|NR_076842.1| 458033 g7193 i0 88.73 94.8405797101449 559 43 100 14 1 552 369 914 Chloracidobacterium thermophilum strain B 23S ribosomal RNA, complete sequence blastn 52352 665 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Chloracidobacterium Chloracidobacterium thermophilum
14182199 14182199 PRJNA1005695_P_NODE_27752_length_284_cov_1.165877_g26900_i0 PRJNA1005695 27752 284 1.165877 3.31109068 Bryobacterales bacterium F-183 2802972 Bacteria Bacteria 291 5.1000000000000005e-74   NTclustered gi|2131941663|dbj|AP025252.1| 2802972 g26900 i0 90.222 130.669014084507 225 18 79 3 60 284 634682 634902 Bryobacterales bacterium F-183 DNA, nearly complete genome blastn 37110 291 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium F-183
15456172 15456172 PRJNA1005695_P_NODE_28993_length_277_cov_3.200980_g28141_i0 PRJNA1005695 28993 277 3.20098 8.8667146 Paludibaculum fermentans 1473598 Bacteria Bacteria 324 4.89e-84   NTclustered gi|1929489624|gb|CP063849.1| 1473598 g28141 i0 88.087 203.512635379061 277 28 100 3 1 277 4784548 4784819 Paludibaculum fermentans strain P105 chromosome, complete genome blastn 56373 324 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae Paludibaculum Paludibaculum fermentans
16730287 16730287 PRJNA1005695_P_NODE_10574_length_477_cov_2.722772_g9722_i0 PRJNA1005695 10574 477 2.722772 12.98762244 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 52.8 0.046   NTclustered gi|2874253700|emb|OY969426.1| 2651171 g9722 i0 100 0.117400419287212 28 0 6 0 171 198 1355450 1355423 MAG: Thermoanaerobaculia bacterium isolate MFD02979.bin.c.1 genome assembly, chromosome: 1 blastn 56 52.8 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
16730346 16730346 PRJNA1005695_P_NODE_17894_length_357_cov_2.577465_g17042_i0 PRJNA1005695 17894 357 2.577465 9.20155005 Bryobacterales bacterium F-183 2802972 Bacteria Bacteria 627 4.4199999999999986e-175   NTclustered gi|2131941663|dbj|AP025252.1| 2802972 g17042 i0 98.319 129.857142857143 357 6 100 0 1 357 633728 633372 Bryobacterales bacterium F-183 DNA, nearly complete genome blastn 46359 627 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium F-183
20554661 20554661 PRJNA1005695_P_NODE_23277_length_311_cov_3.500000_g22425_i0 PRJNA1005695 23277 311 3.5 10.885 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 575 1.3899999999999995e-159   NTclustered gi|157142413|gb|EU122684.1| 171953 g22425 i0 100 99.7845659163987 311 0 100 0 1 311 218 528 Uncultured Acidobacteria bacterium clone KL2-087 16S ribosomal RNA gene, partial sequence blastn 31033 575 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
21830368 21830368 PRJNA1005695_P_NODE_34898_length_252_cov_2.240223_g34046_i0 PRJNA1005695 34898 252 2.240223 5.64536196 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 444 3.2299999999999996e-120   NTclustered gi|2874253862|emb|OY969918.1| 171953 g34046 i0 98.413 125.416666666667 252 4 100 0 1 252 2908054 2907803 MAG: uncultured Acidobacteriota bacterium isolate MFD04967.bin.c.4 genome assembly, chromosome: 1 blastn 31605 444 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
21830379 21830379 PRJNA1005695_P_NODE_35958_length_250_cov_1.440678_g35106_i0 PRJNA1005695 35958 250 1.440678 3.601695 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 309 1.22e-79   NTclustered gi|2874253796|emb|OY969780.1| 194844 g35106 i0 90.041 101.488 241 20 96 4 1 239 285729 285967 MAG: uncultured Acidobacteriaceae bacterium isolate MFD09603.bin.c.4 genome assembly, chromosome: 1 blastn 25372 309 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
23105864 23105864 PRJNA1005695_P_NODE_39299_length_243_cov_2.294118_g38447_i0 PRJNA1005695 39299 243 2.294118 5.57470674 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 346 8.97e-91   NTclustered gi|2874253750|emb|OY969625.1| 194844 g38447 i0 92.857 111.448559670782 238 17 98 0 1 238 2558 2321 MAG: uncultured Acidobacteriaceae bacterium isolate MFD09495.bin.1.66 genome assembly, chromosome: 1 blastn 27082 346 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
28992749 28992749 PRJNA1005695_P_NODE_1268_length_1406_cov_2.809452_g904_i0 PRJNA1005695 1268 1406 2.809452 39.50089512 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 100 2.36e-18   NR HEX5069531.1 2910147 g904 i0 28.6 3.80440967283073 262 152 52.3 7 1386 652 369 612 HEX5069531.1 long-chain fatty acid--CoA ligase [Vicinamibacterales bacterium] diamond 5349 100 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
30350963 30350963 PRJNA1005695_P_NODE_37432_length_247_cov_1.344828_g36580_i0 PRJNA1005695 37432 247 1.344828 3.32172516 Blastocatellia bacterium 2052146 Bacteria Bacteria 45.4 0.00375   NR MBK6313972.1 2052146 g36580 i0 34.1 1.88259109311741 85 51 97.2 2 242 3 59 143 MBK6313972.1 ABC transporter ATP-binding protein [Blastocatellia bacterium] diamond 465 45.4 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
31638742 31638742 PRJNA1005695_P_NODE_35516_length_251_cov_0.876404_g34664_i0 PRJNA1005695 35516 251 0.876404 2.19977404 Pseudomonadati 3379134 Bacteria Bacteria 50.1 1.04e-4   NR WP_164981626.1 1560006 g34664 i0 35 6.47808764940239 80 52 95.6 0 12 251 290 369 WP_164981626.1 tetratricopeptide repeat protein [Silvibacterium dinghuense] diamond 1626 50.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Silvibacterium Silvibacterium dinghuense
31867615 31867615 PRJNA1005695_P_NODE_38977_length_244_cov_0.912281_g38125_i0 PRJNA1005695 38977 244 0.912281 2.22596564 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 42.7 0.0347   NR HEY8549577.1 2910147 g38125 i0 39 0.725409836065574 59 31 66.4 1 59 220 137 195 HEY8549577.1 hypothetical protein [Vicinamibacterales bacterium] diamond 177 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
31962630 31962630 PRJNA1005695_P_NODE_31178_length_267_cov_2.097938_g30326_i0 PRJNA1005695 31178 267 2.097938 5.60149446 Acidobacteriota bacterium 1978231 Bacteria Bacteria 43.1 0.0383   NR MDH3522665.1 1978231 g30326 i0 41.3 0.842696629213483 75 38 82 3 37 255 285 355 MDH3522665.1 hypothetical protein [Acidobacteriota bacterium] diamond 225 43.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32776699 32776699 PRJNA1005695_P_NODE_10180_length_487_cov_1.845411_g9328_i0 PRJNA1005695 10180 487 1.845411 8.98715157 root 1 Root_unresolved Root_unresolved 74.3 2.41e-12   NR MCW5950305.1 2283092 g9328 i0 43 2.49486652977413 107 40 53 2 155 412 36 142 MCW5950305.1 cytochrome c oxidase subunit 3 [Pyrinomonadaceae bacterium] diamond 1215 74.3 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;