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contig_metadata

7 rows where bioproject = "PRJNA1005695" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 7 ✖

bioproject 1

  • PRJNA1005695 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11632117 11632117 PRJNA1005695_P_NODE_30370_length_271_cov_1.414141_g29518_i0 PRJNA1005695 30370 271 1.414141 3.83232211 haloarchaeon 3A1-DGR 1071085 Archaea Archaea 56.5 0.002   NTclustered gi|1804090075|gb|CP048032.1| 1071085 g29518 i0 100 0.431734317343173 30 0 11 0 210 239 1418784 1418813 Haloarchaeon 3A1-DGR strain 3A1-DGR chromosome, complete genome blastn 117 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     haloarchaeon 3A1-DGR
26781400 26781400 PRJNA1005695_P_NODE_17621_length_360_cov_1.630662_g16769_i0 PRJNA1005695 17621 360 1.630662 5.8703832 Methanobrevibacter sp. 66852 Archaea Archaea 67 4.35e-10   NR MBO7713100.1 66852 g16769 i0 37.1 2.04166666666667 132 66 96.7 4 12 359 1 131 MBO7713100.1 hypothetical protein [Methanobrevibacter sp.] diamond 735 67 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
28132625 28132625 PRJNA1005695_P_NODE_39505_length_243_cov_0.917647_g38653_i0 PRJNA1005695 39505 243 0.917647 2.22988221 Methanobacteriota 28890 Archaea Archaea 44.3 0.00236   NR WP_048148373.1 230356 g38653 i0 47.1 2.69135802469136 51 27 63 0 63 215 4 54 WP_048148373.1 50S ribosomal protein P1 [Methanolacinia paynteri] diamond 654 44.7 0.991051454138702 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanolacinia Methanolacinia paynteri
29686783 29686783 PRJNA1005695_P_NODE_7310_length_581_cov_2.129921_g6478_i0 PRJNA1005695 7310 581 2.129921 12.37484101 Thermoplasmata archaeon 1906666 Archaea Archaea 167 4.5e-46   NR MEM4728170.1 1906666 g6478 i0 50 1.85370051635112 164 79 84.2 2 490 2 5 166 MEM4728170.1 NAD(P)-dependent oxidoreductase [Thermoplasmata archaeon] diamond 1077 167 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30343500 30343500 PRJNA1005695_P_NODE_15472_length_386_cov_2.734824_g14620_i0 PRJNA1005695 15472 386 2.734824 10.55642064 Thermococcus 2263 Archaea Archaea 256 4.51e-76   NR WP_167728776.1 163002 g14620 i0 97.7 3.97927461139896 128 3 99.5 0 386 3 80 207 WP_167728776.1 DNA polymerase domain-containing protein [Thermococcus sp. 9N3] diamond 1536 256 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. 9N3
30476974 30476974 PRJNA1005695_P_NODE_30333_length_271_cov_1.575758_g29481_i0 PRJNA1005695 30333 271 1.575758 4.27030418 Thermoplasmata archaeon 1906666 Archaea Archaea 80.9 1.78e-15   NR MEM4728170.1 1906666 g29481 i0 51.8 3.74169741697417 85 37 91.9 2 271 23 357 439 MEM4728170.1 NAD(P)-dependent oxidoreductase [Thermoplasmata archaeon] diamond 1014 80.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31646158 31646158 PRJNA1005695_P_NODE_31677_length_265_cov_1.619792_g30825_i0 PRJNA1005695 31677 265 1.619792 4.2924488 Thermoplasmatota archaeon 2806419 Archaea Archaea 43.5 0.0226   NR MDG6225782.1 2806419 g30825 i0 43.5 0.99622641509434 46 24 50.9 2 97 231 190 234 MDG6225782.1 metalloprotease family protein [Thermoplasmatota archaeon] diamond 264 43.5 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;