RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1005695", tax_clade = "Stenosarchaea group" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA1005695 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11632117 11632117 PRJNA1005695_P_NODE_30370_length_271_cov_1.414141_g29518_i0 PRJNA1005695 30370 271 1.414141 3.83232211 haloarchaeon 3A1-DGR 1071085 Archaea Archaea 56.5 0.002   NTclustered gi|1804090075|gb|CP048032.1| 1071085 g29518 i0 100 0.431734317343173 30 0 11 0 210 239 1418784 1418813 Haloarchaeon 3A1-DGR strain 3A1-DGR chromosome, complete genome blastn 117 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     haloarchaeon 3A1-DGR
28132625 28132625 PRJNA1005695_P_NODE_39505_length_243_cov_0.917647_g38653_i0 PRJNA1005695 39505 243 0.917647 2.22988221 Methanobacteriota 28890 Archaea Archaea 44.3 0.00236   NR WP_048148373.1 230356 g38653 i0 47.1 2.69135802469136 51 27 63 0 63 215 4 54 WP_048148373.1 50S ribosomal protein P1 [Methanolacinia paynteri] diamond 654 44.7 0.991051454138702 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanolacinia Methanolacinia paynteri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;