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contig_metadata

19 rows where bioproject = "PRJNA1005695", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 19 ✖

tax_clade 1

  • Sar · 19 ✖

bioproject 1

  • PRJNA1005695 · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1428235 1428235 PRJNA1005695_P_NODE_24482_length_303_cov_2.426087_g23630_i0 PRJNA1005695 24482 303 2.426087 7.35104361 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.028   NTclustered gi|698803785|ref|XM_009836620.1| 112090 g23630 i0 96.774 0.102310231023102 31 1 10 0 130 160 963 993 Aphanomyces astaci hypothetical protein mRNA blastn 31 52.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
9081180 9081180 PRJNA1005695_P_NODE_8768_length_527_cov_3.821586_g7921_i0 PRJNA1005695 8768 527 3.821586 20.13975822 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 204 1.2999999999999999e-58   NR KAG1709295.1 4784 g7921 i0 64.5 58.3377609108159 172 48 96.8 3 515 6 546 706 KAG1709295.1 hypothetical protein DVH05_019938 [Phytophthora capsici] diamond 30744 204 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
12907144 12907144 PRJNA1005695_P_NODE_17531_length_361_cov_1.888889_g16679_i0 PRJNA1005695 17531 361 1.888889 6.81888929 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 128 5.6e-34   NR KAJ8578052.1 4785 g16679 i0 64.9 2.32686980609418 94 32 78.1 1 287 6 117 209 KAJ8578052.1 hypothetical protein ON010_g1153 [Phytophthora cinnamomi] diamond 840 128 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
15456146 15456146 PRJNA1005695_P_NODE_25933_length_294_cov_2.117647_g25081_i0 PRJNA1005695 25933 294 2.117647 6.22588218 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 130 1.22e-25   NTclustered gi|2794923360|ref|XM_067881981.1| 164328 g25081 i0 80.723 4.21768707482993 166 32 56 0 80 245 274 439 Phytophthora ramorum Calmodulin (KRP23_11430), partial mRNA blastn 1240 130 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
20554728 20554728 PRJNA1005695_P_NODE_30977_length_268_cov_1.825641_g30125_i0 PRJNA1005695 30977 268 1.825641 4.89271788 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 141 5.09e-29   NTclustered gi|669161029|ref|XM_008617855.1| 1156394 g30125 i0 81.111 2.01119402985075 180 30 66 4 5 182 715 892 Saprolegnia diclina VS20 hypothetical protein mRNA blastn 539 141 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
23105685 23105685 PRJNA1005695_P_NODE_19339_length_343_cov_2.714815_g18487_i0 PRJNA1005695 19339 343 2.714815 9.31181545 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.032   NTclustered gi|2795027578|ref|XM_067926281.1| 4785 g18487 i0 100 0.0816326530612245 28 0 8 0 174 201 135 162 Phytophthora cinnamomi myosinlike protein (IUM83_02370), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
26939387 26939387 PRJNA1005695_P_NODE_39522_length_243_cov_0.917647_g38670_i0 PRJNA1005695 39522 243 0.917647 2.22988221 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 68.9 2.21e-11   NR TYZ67071.1 1485010 g38670 i0 50.8 4.65432098765432 65 32 80.2 0 241 47 880 944 TYZ67071.1 hypothetical protein PybrP1_012233 [[Pythium] brassicae (nom. inval.)] diamond 1131 68.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
27982117 27982117 PRJNA1005695_P_NODE_38085_length_246_cov_0.901734_g37233_i0 PRJNA1005695 38085 246 0.901734 2.21826564 Phytophthora lilii 2077276 SAR_Eukaryotes SAR_Eukaryotes 62.8 3.43e-9   NR GMF12222.1 2077276 g37233 i0 51 6.14634146341463 51 25 62.2 0 94 246 243 293 GMF12222.1 unnamed protein product [Phytophthora lilii] diamond 1512 62.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora lilii
29143112 29143112 PRJNA1005695_P_NODE_36949_length_248_cov_1.502857_g36097_i0 PRJNA1005695 36949 248 1.502857 3.72708536 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 90.9 3.49e-19   NR KUF95612.1 4792 g36097 i0 76.8 1.98387096774194 82 19 99.2 0 246 1 85 166 KUF95612.1 RNA polymerase I-specific transcription initiation factor RRN3 [Phytophthora nicotianae] diamond 492 90.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
29245060 29245060 PRJNA1005695_P_NODE_17409_length_362_cov_2.595156_g16557_i0 PRJNA1005695 17409 362 2.595156 9.39446472 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 130 1.46e-34   NR KAJ8578052.1 4785 g16557 i0 63.9 2.39502762430939 97 34 80.4 1 59 349 117 212 KAJ8578052.1 hypothetical protein ON010_g1153 [Phytophthora cinnamomi] diamond 867 130 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
29553059 29553059 PRJNA1005695_P_NODE_29270_length_276_cov_1.783251_g28418_i0 PRJNA1005695 29270 276 1.783251 4.92177276 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 97.1 2.8100000000000003e-21   NR KAF1329759.1 82926 g28418 i0 60.5 3.26086956521739 76 30 82.6 0 47 274 92 167 KAF1329759.1 Agc protein kinase, partial [Globisporangium splendens] diamond 900 97.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
30375022 30375022 PRJNA1005695_P_NODE_20092_length_337_cov_0.905303_g19240_i0 PRJNA1005695 20092 337 0.905303 3.05087111 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 62.4 1.37e-8   NR KAJ8552539.1 4785 g19240 i0 35.1 4.9406528189911 111 70 98.8 2 335 3 119 227 KAJ8552539.1 hypothetical protein ON010_g10006 [Phytophthora cinnamomi] diamond 1665 62.8 0.993630573248408 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
30666318 30666318 PRJNA1005695_P_NODE_15873_length_381_cov_1.012987_g15021_i0 PRJNA1005695 15873 381 1.012987 3.85948047 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 107 2.39e-24   NR KAF0775164.1 112090 g15021 i0 47.2 1.96850393700787 125 47 98.4 3 381 7 295 400 KAF0775164.1 hypothetical protein AaE_001134 [Aphanomyces astaci] diamond 750 107 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
30729558 30729558 PRJNA1005695_P_NODE_28074_length_282_cov_1.526316_g27222_i0 PRJNA1005695 28074 282 1.526316 4.30421112 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0314   NR GLD97538.1 114742 g27222 i0 38.5 1.1063829787234 52 23 45.7 1 135 7 137 188 GLD97538.1 hypothetical protein PINS_up006228 [Pythium insidiosum] diamond 312 43.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
31108573 31108573 PRJNA1005695_P_NODE_19975_length_338_cov_1.177358_g19123_i0 PRJNA1005695 19975 338 1.177358 3.97947004 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 97.8 2.12e-23   NR KAF0763703.1 112090 g19123 i0 46.7 8.38757396449704 105 54 93.2 1 2 316 35 137 KAF0763703.1 hypothetical protein AaE_003161, partial [Aphanomyces astaci] diamond 2835 97.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
31329980 31329980 PRJNA1005695_P_NODE_33276_length_258_cov_1.848649_g32424_i0 PRJNA1005695 33276 258 1.848649 4.76951442 Peronosclerospora sorghi 230839 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0222   NR KAI9906496.1 230839 g32424 i0 37.3 0.779069767441861 67 40 77.9 1 203 3 201 265 KAI9906496.1 hypothetical protein PsorP6_003465 [Peronosclerospora sorghi] diamond 201 43.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronosclerospora Peronosclerospora sorghi
31899407 31899407 PRJNA1005695_P_NODE_35837_length_250_cov_2.429379_g34985_i0 PRJNA1005695 35837 250 2.429379 6.0734475 Nothophytophthora sp. Chile5 2483409 SAR_Eukaryotes SAR_Eukaryotes 46.6 9.83e-4   NR RLN93368.1 2483409 g34985 i0 35.7 1.584 70 44 82.8 1 44 250 62 131 RLN93368.1 hypothetical protein BBJ28_00024098, partial [Nothophytophthora sp. Chile5] diamond 396 46.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Nothophytophthora Nothophytophthora sp. Chile5
31986703 31986703 PRJNA1005695_P_NODE_32118_length_263_cov_1.678947_g31266_i0 PRJNA1005695 32118 263 1.678947 4.41563061 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 53.9 1.4e-6   NR KAI9991102.1 4787 g31266 i0 47.6 4.58555133079848 82 43 93.5 0 247 2 29 110 KAI9991102.1 hypothetical protein PInf_018730 [Phytophthora infestans] diamond 1206 53.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
32113500 32113500 PRJNA1005695_P_NODE_24338_length_304_cov_2.025974_g23486_i0 PRJNA1005695 24338 304 2.025974 6.15896096 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 62 1.39e-8   NR GMF20669.1 2077276 g23486 i0 43.1 1.98355263157895 72 32 62.2 2 2 190 3004 3075 GMF20669.1 unnamed protein product [Phytophthora lilii] diamond 603 62 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora lilii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;